RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 UBE2NP61088 152 aaKnown RBP9.16□□□□□ -0.94
ATXN3-201ENST00000340660 ZNF763Q0D2J5 394 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 CCL17Q92583 94 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 TFAP2CQ92754 450 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 IL22Q9GZX6 179 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 PPA2Q9H2U2 334 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 NELFAQ9H3P2 528 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 GOLPH3Q9H4A6 298 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 ACOXLQ9NUZ1 547 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 CES1P1Q9UKY3 287 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 ZNF346Q9UL40 294 aaKnown RBP9.16□□□□□ -0.94
ATXN3-201ENST00000340660 A0A1W2PRX2 142 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 ANKRD61A6NGH8 418 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 KIF2AO00139 706 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-201ENST00000340660 SLC25A17O43808 307 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 TGDSO95455 350 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 IGHV2-70P01814 119 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 MYF6P23409 242 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 PAX7P23759 505 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 KIR2DS4P43632 304 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 PRIM2P49643 509 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 FGF12P61328 243 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 GNB2P62879 340 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 DGCR2P98153 550 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 RAB39AQ14964 217 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 PCGF3Q3KNV8 242 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 SPATS1Q496A3 300 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 LAS2Q8IYD9 372 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 LINC00482Q8N8I6 264 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 OR7G2Q8NG99 324 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 KRT35Q92764 455 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 BCL2L2Q92843 193 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-201ENST00000340660 ZNF524Q96C55 264 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 NEURL3Q96EH8 262 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 PRR25Q96S07 402 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 CRLF2Q9HC73 371 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 HINT3Q9NQE9 182 aaKnown RBP9.15□□□□□ -0.94
ATXN3-201ENST00000340660 NKIRAS2Q9NYR9 191 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 KCNG2Q9UJ96 466 aa9.15□□□□□ -0.94
ATXN3-201ENST00000340660 BZW2Q9Y6E2 419 aaKnown RBP9.15□□□□□ -0.94
ATXN3-201ENST00000340660 FAT2Q9NYQ8 4349 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 ALG1L2C9J202 215 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 E7EVH7 732 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 LGI1O95970 557 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 PF4V1P10720 104 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 CBR1P16152 277 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 EPORP19235 508 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 GLRXP35754 106 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 SLC16A1P53985 500 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 IL2P60568 153 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 NPRL3Q12980 569 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 ESCO2Q56NI9 601 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 PAQR6Q6TCH4 344 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 NHLRC1Q6VVB1 395 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 OR7G3Q8NG95 312 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 WIPF2Q8TF74 440 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-201ENST00000340660 RAB40AQ8WXH6 277 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 ANAPC16Q96DE5 110 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 TSPAN32Q96QS1 320 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 OR5B2Q96R09 309 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 ATOH8Q96SQ7 321 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 EGFL8Q99944 293 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 CAPS2Q9BXY5 557 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 GPR61Q9BZJ8 451 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 DCAF16Q9NXF7 216 aa9.14□□□□□ -0.95
ATXN3-201ENST00000340660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATXN3-201ENST00000340660 CENPVL1A0A0U1RR11 272 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 CENPVL3A0A0U1RRI6 287 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 GPR171O14626 319 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF189O75820 626 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 OPN1SWP03999 348 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 SERPING1P05155 500 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 APRTP07741 180 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 SBK2P0C263 348 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF14P17017 642 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 CSNK2A2P19784 350 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 DIO1P49895 249 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 HNMTP50135 292 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 DDX39BQ13838 428 aaKnown RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 TRADDQ15628 312 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 DECR1Q16698 335 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 HIST2H2ACQ16777 129 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 FBXO48Q5FWF7 155 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 PAGE2BQ5JRK9 111 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 RBM20Q5T481 1227 aaKnown RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 HIST2H2AA3Q6FI13 130 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 SLC48A1Q6P1K1 146 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 TMEM154Q6P9G4 183 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 C6orf89Q6UWU4 347 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 MTDHQ86UE4 582 aaKnown RBP9.13□□□□□ -0.95
ATXN3-201ENST00000340660 BBS4Q96RK4 519 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 TMEM79Q9BSE2 394 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 SAP30LQ9HAJ7 183 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 TMEM45AQ9NWC5 275 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 TAS2R13Q9NYV9 303 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 TAAR3PQ9P1P4 343 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 PCDHA9Q9Y5H5 950 aa9.13□□□□□ -0.95
ATXN3-201ENST00000340660 DSPPQ9NZW4 1301 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms