RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 C3P1Q6ZMU1 363 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ZNF619Q8N2I2 560 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 PCDHGA5Q9Y5G8 931 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 KIAA1549LQ6ZVL6 1849 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 H3BUI4 141 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 HRKO00198 91 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 OR10H2O60403 315 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 PTBP1P26599 531 aaKnown RBP eCLIP14.84□□□□□ -0.035e-7■■■■■ 52.1
SCARB1-202ENST00000339570 MMP15P51511 669 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ACSM1Q08AH1 577 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 SQSTM1Q13501 440 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 KLF9Q13886 244 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 FAM53BQ14153 422 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 CST6Q15828 149 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 DMKNQ6E0U4 476 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ADAMTSL4Q6UY14 1074 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 OR2L8Q8NGY9 312 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 BRIX1Q8TDN6 353 aaKnown RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ZMAT3Q9HA38 289 aaKnown RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 OR6C74A6NCV1 312 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 ARL6IP5O75915 188 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 TLX1P31314 330 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-202ENST00000339570 ARHGEF6Q15052 776 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 C2orf68Q2NKX9 166 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 PRRT3Q5FWE3 981 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 ZNF765Q7L2R6 523 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 NDUFAF7Q7L592 441 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 SLITRK4Q8IW52 837 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 KCTD12Q96CX2 325 aaKnown RBP14.83□□□□□ -0.04
SCARB1-202ENST00000339570 C2orf42Q9NWW7 574 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 SDHAF2Q9NX18 166 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 ST6GALNAC2Q9UJ37 374 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 ZNF223Q9UK11 482 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-202ENST00000339570 NUP50Q9UKX7 468 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 HEATR5AQ86XA9 2040 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CACNB4O00305 520 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-202ENST00000339570 F13BP05160 661 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CEACAM5P06731 702 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CTSBP07858 339 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CDK2P24941 298 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CDK5R1Q15078 307 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 PON3Q15166 354 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 EIPR1Q53HC9 387 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 DGAT2L6Q6ZPD8 337 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 OR4D10Q8NGI6 311 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 FCAMRQ8WWV6 532 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CNN2Q99439 309 aaKnown RBP14.83□□□□□ -0.04
SCARB1-202ENST00000339570 CD93Q9NPY3 652 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 FBXL2Q9UKC9 423 aa14.83□□□□□ -0.04
SCARB1-202ENST00000339570 TMEM72A0PK05 275 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 PIN1P1O15428 100 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 B3GALT2O43825 422 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 KRT33AO76009 404 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 APOC3P02656 99 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 CCL5P13501 91 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 NANOS3P60323 173 aaKnown RBP14.82□□□□□ -0.04
SCARB1-202ENST00000339570 MFSD13AQ14CX5 517 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TMEM52BQ4KMG9 183 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 FAM74A1Q5RGS3 127 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TMED4Q7Z7H5 227 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TPRA1Q86W33 373 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 WFIKKN2Q8TEU8 576 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 MOAP1Q96BY2 351 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TRPV4Q9HBA0 871 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 IFNGP01579 166 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 ATP1B1P05026 303 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 NID1P14543 1247 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 AGBL4Q5VU57 503 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 STPG2Q8N412 459 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 OR10AC1Q8NH08 325 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 SMIM4Q8WVI0 70 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 ST8SIA2Q92186 375 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 C10orf90Q96M02 699 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 CAMK2AQ9UQM7 478 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TDRD6O60522 2096 aaKnown RBP14.82□□□□□ -0.04
SCARB1-202ENST00000339570 GOSR2O14653 212 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 NFATC1O95644 943 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TNFRSF17Q02223 184 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 ARHGAP11BQ3KRB8 267 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TMEM81Q6P7N7 255 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TNFAIP8L1Q8WVP5 186 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TRIM43Q96BQ3 446 aaPredicted RBP14.82□□□□□ -0.04
SCARB1-202ENST00000339570 SMIM19Q96E16 107 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 Q96M85 177 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 MNTQ99583 582 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 ELF4Q99607 663 aaPredicted RBP14.82□□□□□ -0.04
SCARB1-202ENST00000339570 MCCC2Q9HCC0 563 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 TCF7L1Q9HCS4 588 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 NTMQ9P121 344 aa14.82□□□□□ -0.04
SCARB1-202ENST00000339570 PRR32B1ATL7 298 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 G3V3Q6 166 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 PYCARD-AS1I3L0S3 204 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 ZFPL1O95159 310 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 ZNF35P13682 527 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 NUP62P37198 522 aaPredicted RBP14.81□□□□□ -0.04
SCARB1-202ENST00000339570 DEFB115Q30KQ5 88 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 GARNL3Q5VVW2 1013 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 SLC22A10Q63ZE4 541 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 OR52R1Q8NGF1 315 aa14.81□□□□□ -0.04
SCARB1-202ENST00000339570 TTC9Q92623 222 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms