RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 TRGV8A0A0C4DH27 118 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 DNPH1O43598 174 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 BGLAPP02818 100 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 HOXD4P09016 255 aaPredicted RBP19.84■□□□□ 0.77
SDC3-202ENST00000339394 IFI30P13284 250 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 GNLYP22749 145 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 DNAJA1P31689 397 aaKnown RBP19.84■□□□□ 0.77
SDC3-202ENST00000339394 UQCRFS1P47985 274 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 CTBP2P56545 445 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 H3F3AP84243 136 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 PRKCDQ05655 676 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 GK3PQ14409 553 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 ZNF239Q16600 458 aaKnown RBP19.84■□□□□ 0.77
SDC3-202ENST00000339394 EIF2S3LQ2VIR3 472 aaKnown RBP19.84■□□□□ 0.77
SDC3-202ENST00000339394 HMBOX1Q6NT76 420 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 PPP4R4Q6NUP7 873 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 RPTNQ6XPR3 784 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 TMEM179BQ7Z7N9 219 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 MEX3DQ86XN8 651 aaKnown RBP19.84■□□□□ 0.77
SDC3-202ENST00000339394 RPRMLQ8N4K4 120 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 UCN2Q96RP3 112 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 BDH2Q9BUT1 245 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 CALHM2Q9HA72 323 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 CLCF1Q9UBD9 225 aa19.84■□□□□ 0.77
SDC3-202ENST00000339394 MCTS1Q9ULC4 181 aaKnown RBP19.84■□□□□ 0.77
SDC3-202ENST00000339394 IGHV3-15A0A0B4J1V0 119 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 OR10H3O60404 316 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 EIF1BO60739 113 aaKnown RBP19.83■□□□□ 0.77
SDC3-202ENST00000339394 E2F6O75461 281 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 TGM6O95932 706 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 MT-ATP6P00846 226 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 STSP08842 583 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 KLK2P20151 261 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 CA7P43166 264 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 AGFG1P52594 562 aaKnown RBP19.83■□□□□ 0.77
SDC3-202ENST00000339394 CASP6P55212 293 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 MICAQ29983 383 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 C1orf185Q5T7R7 199 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 NSUN5P2Q63ZY6 315 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 ZER1Q7Z7L7 766 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 LRRC17Q8N6Y2 441 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 ROBO4Q8WZ75 1007 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 SGTBQ96EQ0 304 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 PKP2Q99959 881 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 NANSQ9NR45 359 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 SEC14L4Q9UDX3 406 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 POLEQ07864 2286 aa19.83■□□□□ 0.77
SDC3-202ENST00000339394 HTR3EA5X5Y0 456 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 CD8B2A6NJW9 211 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 SLC22A20A6NK97 555 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 ZNF814B7Z6K7 855 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 SMAD9O15198 467 aaKnown RBP19.83■□□□□ 0.76
SDC3-202ENST00000339394 FZD7O75084 574 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 AKR7A3O95154 331 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 SYNGR4O95473 234 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 MAKP20794 623 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 GRPRP30550 384 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 OMPP47874 163 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 MFSD13AQ14CX5 517 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 PAQR6Q6TCH4 344 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 B3GNT6Q6ZMB0 384 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 SLC46A3Q7Z3Q1 461 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 CDK20Q8IZL9 346 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 PIGXQ8TBF5 258 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 ZHX1-C8orf76Q96EF9 292 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 SEMA6AQ9H2E6 1030 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 FKRPQ9H9S5 495 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 ZNF229Q9UJW7 825 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 ZNF175Q9Y473 711 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 CORINQ9Y5Q5 1042 aa19.83■□□□□ 0.76
SDC3-202ENST00000339394 M0R082 166 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 AQP8O94778 261 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 CCNB2O95067 398 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 FUT1P19526 365 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 GTF2E2P29084 291 aaKnown RBP19.82■□□□□ 0.76
SDC3-202ENST00000339394 ZNF770Q6IQ21 691 aaPredicted RBP19.82■□□□□ 0.76
SDC3-202ENST00000339394 SEM1Q6ZVN7 128 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 TMPRSS11FQ6ZWK6 438 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 CCDC103Q8IW40 242 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 LINC00471Q8N535 108 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 TMEM99Q8N816 258 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 OR9Q2Q8NGE9 314 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 ZNF417Q8TAU3 575 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 PRR7Q8TB68 274 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 CENPNQ96H22 339 aaPredicted RBP19.82■□□□□ 0.76
SDC3-202ENST00000339394 FAM46AQ96IP4 442 aaKnown RBP19.82■□□□□ 0.76
SDC3-202ENST00000339394 ZNF587Q96SQ5 575 aaPredicted RBP19.82■□□□□ 0.76
SDC3-202ENST00000339394 PRRG4Q9BZD6 226 aa19.82■□□□□ 0.76
SDC3-202ENST00000339394 CDC42EP2O14613 210 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 OR7A10O76100 309 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 ASAH2BP0C7U1 165 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 IFNGR2P38484 337 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 GPR4P46093 362 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 NUP107P57740 925 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 FCRLAQ7L513 359 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 MAMDC2Q7Z304 686 aaPredicted RBP19.81■□□□□ 0.76
SDC3-202ENST00000339394 HS3ST5Q8IZT8 346 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 LIPHQ8WWY8 451 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 WNT2BQ93097 391 aa19.81■□□□□ 0.76
SDC3-202ENST00000339394 GPA33Q99795 319 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms