RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ZNF701Q9NV72 531 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-201ENST00000338963 F6UZH7 168 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 OR2T7P0C7T2 308 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 LINC00032P0C843 101 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 EBLN1P0CF75 366 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 AVPR1AP37288 418 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CAPZBP47756 277 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ERVFRD-1P60508 538 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 WDR5P61964 334 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 OR5I1Q13606 314 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 RUNX2Q13950 521 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM183BQ1AE95 376 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 EXOSC6Q5RKV6 272 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 NPNTQ6UXI9 565 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM151AQ8N4L1 468 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SLC5A8Q8N695 610 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SPPL2AQ8TCT8 520 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 GEMIN6Q8WXD5 167 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ATG4CQ96DT6 458 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TP53RKQ96S44 253 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CLCC1Q96S66 551 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 C1QTNF3Q9BXJ4 246 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 BCO2Q9BYV7 579 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CPVLQ9H3G5 476 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 FZD3Q9NPG1 666 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TMPRSS4Q9NRS4 437 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 FLRT1Q9NZU1 646 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SAE1Q9UBE0 346 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CACFD1Q9UGQ2 172 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SCGB1D2O95969 90 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 APODP05090 189 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CLEC3BP05452 202 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 C8AP07357 584 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 DCNP07585 359 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ELFN1P0C7U0 828 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ACP2P11117 423 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ACPPP15309 386 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF10P21506 573 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 IDSP22304 550 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 GJA5P36382 358 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SULT1A1P50225 295 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 AKR1C2P52895 323 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 BIDP55957 195 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SCAND1P57086 179 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 OR4D1Q15615 310 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CATSPERDQ86XM0 798 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 GPR135Q8IZ08 494 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 HS3ST5Q8IZT8 346 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 GPC2Q8N158 579 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 KLHDC1Q8N7A1 406 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SLC30A7Q8NEW0 376 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 C20orf144Q9BQM9 153 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 WDR18Q9BV38 432 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TBL1XR1Q9BZK7 514 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 NRSN2Q9GZP1 204 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TBC1D17Q9HA65 648 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 LPAR2Q9HBW0 351 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 EXOSC3Q9NQT5 275 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 MRPS18AQ9NVS2 196 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM161AQ9NX61 479 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 PSG11Q9UQ72 335 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CFAP20Q9Y6A4 193 aaKnown RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 COL22A1Q8NFW1 1626 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CHD1O14646 1710 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 FAM166BA8MTA8 275 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 YY2O15391 372 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 MOSPD3O75425 235 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SLC25A12O75746 678 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 OR2C1O95371 312 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CD8AP01732 235 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 IFNW1P05000 195 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 RAB7AP51149 207 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 HBA1P69905 142 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 NRG1Q02297 640 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF252P-AS1Q0IIN9 211 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 GAS6Q14393 721 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF235Q14590 738 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SYPL1Q16563 259 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CARD16Q5EG05 197 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 MTFR2Q6P444 385 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 NETO1Q8TDF5 533 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM234Q8WY98 164 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SNHG12Q9BXW3 62 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 FBXO44Q9H4M3 255 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 MOB1AQ9H8S9 216 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 HRASLSQ9HDD0 168 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 PRODH2Q9UF12 536 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CDC42EP3Q9UKI2 254 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CLEC4EQ9ULY5 219 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SLC22A13Q9Y226 551 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 LRP5O75197 1615 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 TRAV30A0A087WSZ9 112 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 A0A1W2PPH5 198 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ZAR1LA6NP61 321 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 F5H423 210 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF432O94892 652 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 SCGB1D1O95968 90 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 GIMD1P0DJR0 217 aa3.85□□□□□ -1.79
NEDD4-201ENST00000338963 POU3F2P20265 443 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-201ENST00000338963 CD34P28906 385 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms