RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZNF730Q6ZMV8 503 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 MAMDC2Q7Z304 686 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 TSEN54Q7Z6J9 526 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 MRGPRGQ86SM5 289 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 MARVELD2Q8N4S9 558 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 PIGXQ8TBF5 258 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 CANT1Q8WVQ1 401 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 ACOT11Q8WXI4 607 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 SDCCAG3Q96C92 435 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 INTS12Q96CB8 462 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 TACO1Q9BSH4 297 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 CHID1Q9BWS9 393 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 ASPNQ9BXN1 380 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 RNF122Q9H9V4 155 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 GP6Q9HCN6 339 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 KLHL9Q9P2J3 617 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF629Q9UEG4 869 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 TMCC3Q9ULS5 477 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 RNF6Q9Y252 685 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 CORINQ9Y5Q5 1042 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 ESPL1Q14674 2120 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 DNAJC13O75165 2243 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 HEATR5AQ86XA9 2040 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 NBASA2RRP1 2371 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 IGHV3-15A0A0B4J1V0 119 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 A0A0G2JNJ9 132 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 TCRBV3S1A0A5B6 114 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 GPR171O14626 319 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 DVL2O14641 736 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 SMAD9O15198 467 aaKnown RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 CYTIPO60759 359 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 PRSS23O95084 383 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 AKR7A3O95154 331 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 VAMP5O95183 116 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 OR6A2O95222 327 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 CH25HO95992 272 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 IL18BPO95998 194 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 IGF2P01344 180 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 MT-ND1P03886 318 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 YES1P07947 543 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 CHRNB4P30926 498 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 H3F3AP84243 136 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 ADORA2A-AS1P86434 159 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 SPIBQ01892 262 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 PMS2P3Q13401 168 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 PDK3Q15120 406 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 IQCCQ4KMZ1 466 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 FGD3Q5JSP0 725 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 TMEM201Q5SNT2 666 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 OTUD3Q5T2D3 398 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 WDR88Q6ZMY6 472 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 NCCRP1Q6ZVX7 275 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 H1FNTQ75WM6 255 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 CCDC71Q8IV32 467 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 ADGRG5Q8IZF4 528 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF808Q8N4W9 903 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 TMEM99Q8N816 258 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 RNF128Q8TEB7 428 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 CA5BP1Q8WTZ4 195 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 TMEM255BQ8WV15 326 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 SGTBQ96EQ0 304 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 GMPPAQ96IJ6 420 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 PTDSS2Q9BVG9 487 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 SF3B5Q9BWJ5 86 aaKnown RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 KRCC1Q9NPI7 259 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 NANSQ9NR45 359 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 CCM2LQ9NUG4 571 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 Q9UFV3 132 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 RASD1Q9Y272 281 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 B3GALT5Q9Y2C3 310 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 EMC9Q9Y3B6 208 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 TESMINQ9Y4I5 508 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 ZGRF1Q86YA3 2104 aa10.64□□□□□ -0.71
SPTLC1-202ENST00000337841 FREM3P0C091 2139 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 GTF3C1Q12789 2109 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 A0A087WUU8 490 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 FTCDNL1E5RQL4 147 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 TNFRSF11BO00300 401 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 KPNA4O00629 521 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 GNGT2O14610 69 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 ZG16O60844 167 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 LDLRP01130 860 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 BGLAPP02818 100 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 IFI30P13284 250 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 NQO1P15559 274 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 FUT1P19526 365 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 CBLP22681 906 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 GRPRP30550 384 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 RRM2P31350 389 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 IFNGR2P38484 337 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 MAGEA2P43356 314 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 UGT2B15P54855 530 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 LTBQ06643 244 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 OR2T5Q6IEZ7 315 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 PODNL1Q6PEZ8 512 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 MBOAT2Q6ZWT7 520 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms