RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 ZNF773Q6PK81 442 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 C5orf46Q6UWT4 87 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 AHSA2Q719I0 299 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 OTULINQ96BN8 352 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 ZBTB8AQ96BR9 441 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 ARL5BQ96KC2 179 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 ERMAPQ96PL5 475 aaPredicted RBP13.28□□□□□ -0.28
CBX3-201ENST00000337620 TMEM185BQ9H7F4 350 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 ERVK-18Q9QC07 812 aa13.28□□□□□ -0.28
CBX3-201ENST00000337620 CFAP47Q6ZTR5 3102 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 ZNF208O43345 1280 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 GRK5P34947 590 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 RPS4XP62701 263 aaKnown RBP13.27□□□□□ -0.28
CBX3-201ENST00000337620 SLC35A2P78381 396 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 OCLNQ16625 522 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 SLC6A19Q695T7 634 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 MAMDC2Q7Z304 686 aaPredicted RBP13.27□□□□□ -0.28
CBX3-201ENST00000337620 GGHQ92820 318 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 HES7Q9BYE0 225 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 DUSP21Q9H596 190 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 KLHL1Q9NR64 748 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 PSORS1C1Q9UIG5 152 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 HIF3AQ9Y2N7 669 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 IER3IP1Q9Y5U9 82 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 SNX5Q9Y5X3 404 aa13.27□□□□□ -0.28
CBX3-201ENST00000337620 CLCA1A8K7I4 914 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 OR2T1O43869 369 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 MT-ATP6P00846 226 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 HTR1AP08908 422 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 ADH6P28332 368 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 RPL5P46777 297 aaKnown RBP13.27□□□□□ -0.29
CBX3-201ENST00000337620 MAP2K6P52564 334 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 SYT14P1Q58G82 188 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 TMEM201Q5SNT2 666 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 RAET1LQ5VY80 246 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 MEDAGQ5VYS4 303 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 DPY19L2P2Q6ZN68 376 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 KCTD8Q6ZWB6 473 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 SLC43A2Q8N370 569 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 IPCEF1Q8WWN9 437 aaPredicted RBP13.27□□□□□ -0.29
CBX3-201ENST00000337620 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 UBL7Q96S82 380 aaPredicted RBP13.27□□□□□ -0.29
CBX3-201ENST00000337620 COPS4Q9BT78 406 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 SEC14L4Q9UDX3 406 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 BAIAP2Q9UQB8 552 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 ADAM18Q9Y3Q7 739 aa13.27□□□□□ -0.29
CBX3-201ENST00000337620 SPIN1Q9Y657 262 aaPredicted RBP13.27□□□□□ -0.29
CBX3-201ENST00000337620 EFSO43281 561 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 TLX3O43711 291 aaPredicted RBP13.26□□□□□ -0.29
CBX3-201ENST00000337620 ZIC3O60481 467 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 GRPRP30550 384 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 NR1H2P55055 460 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 ERVK-25P63136 954 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 RPL18Q07020 188 aaKnown RBP13.26□□□□□ -0.29
CBX3-201ENST00000337620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.26□□□□□ -0.295e-7■□□□□ 10.5
CBX3-201ENST00000337620 ALG10Q5BKT4 473 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 SLC25A30Q5SVS4 291 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 C3orf33Q6P1S2 294 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 SPARTQ8N0X7 666 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 ZNF248Q8NDW4 579 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 ZNF582Q96NG8 517 aaPredicted RBP13.26□□□□□ -0.29
CBX3-201ENST00000337620 ZNF552Q9H707 407 aaPredicted RBP13.26□□□□□ -0.29
CBX3-201ENST00000337620 LOC400499M0QZD8 3231 aa13.26□□□□□ -0.29
CBX3-201ENST00000337620 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 OR5H15A6NDH6 313 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 FAM183AA6NL82 134 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 TRIM64CA6NLI5 447 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 RGS10O43665 173 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 F13BP05160 661 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 RFPL3SP0C7P2 107 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 UQCRC1P31930 480 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 MFAP5Q13361 173 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 OR7A5Q15622 319 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 CRTC2Q53ET0 693 aaPredicted RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 CPOQ8IVL8 374 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 GTPBP8Q8N3Z3 284 aaPredicted RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 FDCSPQ8NFU4 85 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 OR5J2Q8NH18 312 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 FAM173AQ9BQD7 235 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 KATNB1Q9BVA0 655 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 ASPNQ9BXN1 380 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.25□□□□□ -0.29
CBX3-201ENST00000337620 ZFP64Q9NPA5 681 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 CCNB1IP1Q9NPC3 277 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 CMC2Q9NRP2 79 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 BOKQ9UMX3 212 aaPredicted RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 LRRC3CA6NJW4 275 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 RIIAD1A6NNX1 92 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 C11orf98E9PRG8 122 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 TRAPPC6AO75865 159 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 AHCYP23526 432 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 GTF2E2P29084 291 aaKnown RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 SFTPDP35247 375 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 IDUAP35475 653 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms