RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 KLHL36Q8N4N3 616 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 BRIX1Q8TDN6 353 aaKnown RBP11.49□□□□□ -0.57
LIMK1-201ENST00000336180 RFKQ969G6 155 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 OMA1Q96E52 524 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 CCDC74BQ96LY2 380 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 PRRG3Q9BZD7 231 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 TMEM185BQ9H7F4 350 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 PRODH2Q9UF12 536 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 EPHA6Q9UF33 1036 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 VDAC3Q9Y277 283 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 HRH3Q9Y5N1 445 aa11.49□□□□□ -0.57
LIMK1-201ENST00000336180 LY6G6EA0A0G2JKS1 128 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 FITM1A5D6W6 292 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 OR6C68A6NDL8 312 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 LOC110117498-PIK3R3F6TDL0 507 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 FOXK1P85037 733 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 SERTAD2Q14140 314 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 KCNJ8Q15842 424 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF141Q15928 474 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 RNASE12Q5GAN4 147 aaKnown RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 TUBA3EQ6PEY2 450 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF322Q6U7Q0 402 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 TMPRSS11FQ6ZWK6 438 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 COX15Q7KZN9 410 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 NKX3-1Q99801 234 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ARHGAP9Q9BRR9 750 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF649Q9BS31 505 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 TBL1XR1Q9BZK7 514 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 MMP27Q9H306 513 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 FBXO8Q9NRD0 319 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 UBQLN4Q9NRR5 601 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 CRNNQ9UBG3 495 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 U3KQA8 63 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 A0A1B0GTH9 108 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 SNTNA6NMZ2 147 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 DCTN6O00399 190 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 POLR1CO15160 346 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 RPP14O95059 124 aaKnown RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 TFP02787 698 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 CCL4P13236 92 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF28P17035 718 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 IL11P20809 199 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ABCD3P28288 659 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 OR10A3P58181 314 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 NDUFA5Q16718 116 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF550Q7Z398 422 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 MRGPREQ86SM8 312 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ADIPOR1Q96A54 375 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 SLC41A2Q96JW4 573 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 TIMP4Q99727 224 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 IGHV5-10-1A0A0J9YXX1 117 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 CCDC182A6NF36 153 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF264O43296 627 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 DYRK3O43781 588 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 CPEP16870 476 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 UGT2B10P36537 528 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 EGR4Q05215 589 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 TIMM50Q3ZCQ8 353 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 VASNQ6EMK4 673 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 LEG1Q6P5S2 330 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 WWTR1Q9GZV5 400 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 SCPEP1Q9HB40 452 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 FGF20Q9NP95 211 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-201ENST00000336180 FANCFQ9NPI8 374 aa11.48□□□□□ -0.57
LIMK1-201ENST00000336180 PMS2P1A4D2B8 440 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 GABRPO00591 440 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SLC30A4O14863 429 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 LAMTOR5O43504 91 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 IGKV3-11P04433 115 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 HEXBP07686 556 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF3P17036 446 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SHC1P29353 583 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 BCAP31P51572 246 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 LIMK1P53667 647 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SKP2Q13309 424 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SPANXN2Q5MJ10 180 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 C19orf48Q6RUI8 117 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 RTL4Q6ZR62 310 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 KANSL1Q7Z3B3 1105 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 UCK1Q9HA47 277 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 COPS7AQ9UBW8 275 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SF3B6Q9Y3B4 125 aaKnown RBP11.47□□□□□ -0.57
LIMK1-201ENST00000336180 RTTNQ86VV8 2226 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 A0A087WUJ7 227 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 IGKV3D-11A0A0A0MRZ8 115 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 TCRBV16S1A1N1A0A5B0 115 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF670-ZNF695F2Z2N8 137 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 G3V3Y1 287 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 RAD1O60671 282 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 HK1P19367 917 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SLC6A6P31641 620 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 PPICP45877 212 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 CTXN1P60606 82 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 PLK5Q496M5 336 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 NKAIN1Q4KMZ8 207 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms