RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 EFCAB9A8MZ26 197 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 KDM4EB2RXH2 506 aaPredicted RBP13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF814B7Z6K7 855 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 M0R082 166 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 PDLIM1O00151 329 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 OR2T1O43869 369 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 MT-ATP6P00846 226 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 GASTP01350 101 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 TPOP07202 933 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ASAH2BP0C7U1 165 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ABOP16442 354 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 FPR3P25089 353 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 GRPRP30550 384 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 CARD18P57730 90 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 CSNK2A1P68400 391 aaPredicted RBP13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF239Q16600 458 aaKnown RBP13.55□□□□□ -0.24
CMC1-201ENST00000334841 GXYLT1Q4G148 440 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 C1orf94Q6P1W5 598 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 PLXDC2Q6UX71 529 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 TMPRSS11FQ6ZWK6 438 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 CD163Q86VB7 1156 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZDHHC13Q8IUH4 622 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ST6GALNAC3Q8NDV1 305 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 OR13C2Q8NGS9 318 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF417Q8TAU3 575 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 FAM57AQ8TBR7 257 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 LIPHQ8WWY8 451 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 OSTF1Q92882 214 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF587Q96SQ5 575 aaPredicted RBP13.55□□□□□ -0.24
CMC1-201ENST00000334841 FEVQ99581 238 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 NIPSNAP1Q9BPW8 284 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 TAPBPLQ9BX59 468 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF229Q9UJW7 825 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 ZNF835Q9Y2P0 537 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 MED12Q93074 2177 aa13.55□□□□□ -0.24
CMC1-201ENST00000334841 IGHV3-15A0A0B4J1V0 119 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 HTR3EA5X5Y0 456 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 CLCA1A8K7I4 914 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 SMAD9O15198 467 aaKnown RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 DNPH1O43598 174 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 SLC19A2O60779 497 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 AKR7A3O95154 331 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 ADAP00813 363 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 SAGP10523 405 aaPredicted RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 POU2F1P14859 743 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 PEX2P28328 305 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 IFNGR2P38484 337 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 GSSP48637 474 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 ARHGDIAP52565 204 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 RAC3P60763 192 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 RPS3AP61247 264 aaKnown RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 SLC35A1P78382 337 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 SLC34A1Q06495 639 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 FHL1Q13642 323 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 TRIP10Q15642 601 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 ACSF3Q4G176 576 aaPredicted RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 OTUD3Q5T2D3 398 aaPredicted RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 PDSS1Q5T2R2 415 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 FAHD1Q6P587 224 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 MAMDC2Q7Z304 686 aaPredicted RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 ADGRE4PQ86SQ3 457 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 GTPBP3Q969Y2 492 aaKnown RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 UCN2Q96RP3 112 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 NANSQ9NR45 359 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 CLCF1Q9UBD9 225 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
CMC1-201ENST00000334841 MGAT4BQ9UQ53 548 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 ZNF407Q9C0G0 2248 aa13.54□□□□□ -0.24
CMC1-201ENST00000334841 SOCS2O14508 198 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 CASQ2O14958 399 aaPredicted RBP13.53□□□□□ -0.24
CMC1-201ENST00000334841 RAMP1O60894 148 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 ENPP1P22413 925 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 GTF2E2P29084 291 aaKnown RBP13.53□□□□□ -0.24
CMC1-201ENST00000334841 DAPP51397 102 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 P2RY4P51582 365 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 RPS4XP62701 263 aaKnown RBP13.53□□□□□ -0.24
CMC1-201ENST00000334841 H3F3AP84243 136 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 PPP2R2BQ00005 443 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 TSPAN31Q12999 210 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 MFSD13AQ14CX5 517 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 PON3Q15166 354 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 SGCBQ16585 318 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 LPCAT4Q643R3 524 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 ABLIM2Q6H8Q1 611 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 ZNF585AQ6P3V2 769 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 PAQR6Q6TCH4 344 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 Q6ZPB1 254 aaPredicted RBP13.53□□□□□ -0.24
CMC1-201ENST00000334841 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 CDK20Q8IZL9 346 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 TMEM99Q8N816 258 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 SCAIQ8N9R8 606 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 ZPLD1Q8TCW7 415 aa13.53□□□□□ -0.24
CMC1-201ENST00000334841 GNPDA2Q8TDQ7 276 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms