RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NPWQ8N729 165 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ABHD4Q8TB40 342 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CD200R1Q8TD46 325 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ACPTQ9BZG2 426 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 ARV1Q9H2C2 271 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OR51B6Q9H340 312 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 CLMPQ9H6B4 373 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 HHATLQ9HCP6 504 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 SLC6A14Q9UN76 642 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TCHHQ07283 1943 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM269A0A1B0GVZ9 245 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 TRAF3IP2O43734 574 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 GJB5O95377 273 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 RAF1P04049 648 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 IGFBP1P08833 259 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-201ENST00000334504 HLA-FP30511 346 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 PTGER1P34995 402 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OR7A5Q15622 319 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
COL4A6-201ENST00000334504 OR2T1O43869 369 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 METTL15P1P0C7V9 234 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 HOXB2P14652 356 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 FCER1GP30273 86 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 SLC1A3P43003 542 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 BTG1P62324 171 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 SUMO1P63165 101 aaKnown RBP9.15□□□□□ -0.94
COL4A6-201ENST00000334504 HBG1P69891 147 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 HBG2P69892 147 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF266Q14584 549 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 OXA1LQ15070 435 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 OR7E24Q6IFN5 339 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 TAS1R3Q7RTX0 852 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM130Q8N3G9 435 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 HORMAD2Q8N7B1 307 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 DIO2Q92813 273 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 FAM122AQ96E09 287 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 REEP6Q96HR9 211 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 DHRS4Q9BTZ2 278 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 CDH20Q9HBT6 801 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 CAMK2AQ9UQM7 478 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 TRABD2BA6NFA1 517 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 ANKUB1A6NFN9 424 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 ANKRD30BLA7E2S9 258 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 CYB5BO43169 146 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 SLC16A7O60669 478 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 ALDOCP09972 364 aaKnown RBP9.15□□□□□ -0.94
COL4A6-201ENST00000334504 PRPH2P23942 346 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 C4orf17Q53FE4 359 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 IGSF11Q5DX21 431 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 C3orf38Q5JPI3 329 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 PRSS45Q7RTY3 260 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 CPEB2Q7Z5Q1 589 aaKnown RBP9.15□□□□□ -0.94
COL4A6-201ENST00000334504 CDH26Q8IXH8 852 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 PRR22Q8IZ63 422 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 OR5B2Q96R09 309 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 MTCH1Q9NZJ7 389 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 CD79AP11912 226 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 SFTPDP35247 375 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 LIPAP38571 399 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 MELKQ14680 651 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 LY6G5CQ5SRR4 150 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 MOB1BQ7L9L4 216 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF610Q8N9Z0 462 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 OR2G3Q8NGZ4 309 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 RTP4Q96DX8 246 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 RAB3CQ96E17 227 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 OR7D2Q96RA2 312 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM175Q9BSA9 504 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF337Q9Y3M9 751 aa9.15□□□□□ -0.94
COL4A6-201ENST00000334504 TK1P04183 234 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 AADACP22760 399 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 HTR2CP28335 458 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 GCAP28676 217 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 HMGCLP35914 325 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 UBE2IP63279 158 aaKnown RBP9.15□□□□□ -0.95
COL4A6-201ENST00000334504 IAH1Q2TAA2 248 aaPredicted RBP9.15□□□□□ -0.95
COL4A6-201ENST00000334504 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.95
COL4A6-201ENST00000334504 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 PLK3Q9H4B4 646 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 KLHL42Q9P2K6 505 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 MYH8P13535 1937 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 OR6C68A6NDL8 312 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 PIRO00625 290 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 TUSC2O75896 110 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 CLDN1O95832 211 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 F10P00742 488 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF888P0CJ79 500 aaPredicted RBP9.15□□□□□ -0.95
COL4A6-201ENST00000334504 OR8G3PP0DMU2 310 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF28P17035 718 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 NTF3P20783 257 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 P2RX1P51575 399 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 OR1Q1Q15612 314 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 TAF9Q16594 264 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM88Q6PEY1 159 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 DMBX1Q8NFW5 382 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 SGIP1Q9BQI5 828 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 LIN7BQ9HAP6 207 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 CUTCQ9NTM9 273 aa9.15□□□□□ -0.95
COL4A6-201ENST00000334504 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms