RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TMEM221A6NGB7 291 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 M0R296 226 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF593O00488 134 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 PRKNO60260 465 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 FOXD2O60548 495 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 MRPS14O60783 128 aaKnown RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ACP2P11117 423 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 GPR50Q13585 617 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 VHLLQ6RSH7 139 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 POGLUT1Q8NBL1 392 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 OR2I1PQ8NGU4 316 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 C16orf52Q8NHV5 167 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 AMBRA1Q9C0C7 1298 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 SPNS1Q9H2V7 528 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 OBP2BQ9NPH6 170 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ETAA1Q9NY74 926 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 LRFN1Q9P244 771 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ADAM18Q9Y3Q7 739 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 SCN4AP35499 1836 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 CHP2O43745 196 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 DAPP51397 102 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 MECP2P51608 486 aaKnown RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ATXN7L3Q14CW9 347 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 COL28A1Q2UY09 1125 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 SAXO2Q658L1 398 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 MORN4Q8NDC4 146 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 CHDHQ8NE62 594 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 GAB3Q8WWW8 586 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 C1orf198Q9H425 327 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 NDUFAF4Q9P032 175 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 TNS1Q9HBL0 1735 aaKnown RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 TMEM72A0PK05 275 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 CD14P08571 375 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 DBHP09172 617 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 OR8G3PP0DMU2 310 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 CRMP1Q14194 572 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 COL13A1Q5TAT6 717 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF691Q5VV52 312 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 PTRH1Q86Y79 214 aaKnown RBP13.86□□□□□ -0.19
C9orf47-201ENST00000334490 OR5M1Q8NGP8 315 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 ASB17Q8WXJ9 295 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 PIGCQ92535 297 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 SYT4Q9H2B2 425 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 SYNPO2LQ9H987 977 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 INPP5EQ9NRR6 644 aa13.86□□□□□ -0.19
C9orf47-201ENST00000334490 OR2W5A6NFC9 320 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 SERPINA5P05154 406 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 BMP4P12644 408 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 P2RX1P51575 399 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 SIGLEC14Q08ET2 396 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 DEFB109BQ30KR1 87 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 GLYR1Q49A26 553 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF585AQ6P3V2 769 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 FAM57BQ71RH2 274 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 SPARTQ8N0X7 666 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 OR5J2Q8NH18 312 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 GOT1L1Q8NHS2 421 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ITFG2Q969R8 447 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 CITED4Q96RK1 184 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ERVK13-1Q9NX77 482 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 IGLV3-16A0A075B6K0 115 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 SFTPBP07988 381 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 TRIM23P36406 574 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 MAP2K3P46734 347 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 RBM45Q8IUH3 476 aaKnown RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 KDM8Q8N371 416 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 BCORP1Q8N888 145 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 SLC25A43Q8WUT9 341 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ZPBPQ9BS86 351 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 IER2Q9BTL4 223 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 A0A1W2PQL4 384 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 TRIM64A6NGJ6 449 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 HMGN4O00479 90 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 PPM1DO15297 605 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 GM2AP17900 193 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 MAB21L1Q13394 359 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 AGAP7PQ5VUJ5 663 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF813Q6ZN06 617 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 AGAP4Q96P64 663 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF587Q96SQ5 575 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 OR51E2Q9H255 320 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 TMEM184BQ9Y519 407 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 NFATC3Q12968 1075 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 TMEM205Q6UW68 189 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 DPY19L4Q7Z388 723 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 OR1N1Q8NGS0 311 aa13.85□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF223Q9UK11 482 aaPredicted RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 YARS2Q9Y2Z4 477 aaKnown RBP13.85□□□□□ -0.19
C9orf47-201ENST00000334490 A0A1B0GTL3 188 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 FCMRO60667 390 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 KCNK2O95069 426 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 SBK3P0C264 359 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 NXPH1P58417 271 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 CNN3Q15417 329 aaKnown RBP13.84□□□□□ -0.19
C9orf47-201ENST00000334490 ARHGAP11BQ3KRB8 267 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 SLC22A6Q4U2R8 563 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 B3GNT8Q7Z7M8 397 aa13.84□□□□□ -0.19
C9orf47-201ENST00000334490 MKXQ8IYA7 352 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms