RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF443Q9Y2A4 671 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 NSG2Q9Y328 171 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PCDHAC2Q9Y5I4 1007 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ENTPD2Q9Y5L3 495 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 LOC105369274A0A096LPK9 316 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TRABD2BA6NFA1 517 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 B4DEV8 164 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 CSO75390 466 aaKnown RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 IGHG1P01857 330 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 THBS1P07996 1170 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 FKBP2P26885 142 aaKnown RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 VGLL4Q14135 290 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 AANATQ16613 207 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OGFOD3Q6PK18 319 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR4N4Q8N0Y3 316 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SENP5Q96HI0 755 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 KIRREL1Q96J84 757 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SLC41A2Q96JW4 573 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 DPH2Q9BQC3 489 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR52D1Q9H346 318 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 COQ3Q9NZJ6 369 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 FAM198AQ9UFP1 575 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 GAB2Q9UQC2 676 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 A0A0B4J2A0 478 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 MYOCOSA0A1B0GUC4 107 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 A0A1B0GVG6 124 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR6C68A6NDL8 312 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SFTA3P0C7M3 94 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 RABGGTBP53611 331 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SUB1P53999 127 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 CLDN10P78369 228 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 VAMP3Q15836 100 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SFRP5Q5T4F7 317 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF852Q6ZMS4 543 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PIWIL3Q7Z3Z3 882 aaKnown RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 FAM217AQ8IXS0 508 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 DNAJC5GQ8N7S2 189 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ADIPOR1Q96A54 375 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SHPKQ9UHJ6 478 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 GPR45Q9Y5Y3 372 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ACOD1A6NK06 481 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 DHPSP49366 369 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 EXOSC2Q13868 293 aaKnown RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ARSJQ5FYB0 599 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 STEAP1BQ6NZ63 245 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TAS1R3Q7RTX0 852 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 LGALS14Q8TCE9 139 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ACOXLQ9NUZ1 547 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 REV1Q9UBZ9 1251 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SSC5DA1L4H1 1573 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TEX50A0A1B0GTY4 177 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 GPR32O75388 356 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 CYC1P08574 325 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 TCTAP57738 103 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 MS4A2Q01362 244 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 COMMD6Q7Z4G1 85 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 OR4N2Q8NGD1 307 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ALOXE3Q9BYJ1 711 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 C1orf198Q9H425 327 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 EGLN3Q9H6Z9 239 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 CBY3A6NI87 242 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 H7BYZ3 331 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 EMP2P54851 167 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 SH3BP2P78314 561 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF91Q05481 1191 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PNRC1Q12796 327 aaPredicted RBP5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PTPRCAPQ14761 206 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 AKIP1Q9NQ31 210 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 IL20RAQ9UHF4 553 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PCDHGA6Q9Y5G7 932 aa5.16□□□□□ -1.58
PTPRB-202ENST00000334414 PPP1R3DO95685 299 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 CHRM2P08172 466 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 MGST1P10620 155 aaKnown RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 CHRNB4P30926 498 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 GATMP50440 423 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 RAB28P51157 221 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM115Q12893 351 aaPredicted RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 SGCAQ16586 387 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 SYPL2Q5VXT5 272 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 PIGQQ9BRB3 760 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 NXF2Q9GZY0 626 aaKnown RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 SYNPO2LQ9H987 977 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 SLC6A20Q9NP91 592 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 INIPQ9NRY2 104 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 B3GAT1Q9P2W7 334 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 DUSP11O75319 330 aaKnown RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 TNFRSF17Q02223 184 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 AKR1C1Q04828 323 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 OR4D1Q15615 310 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 PMEPA1Q969W9 287 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 PINX1Q96BK5 328 aaKnown RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 NPAS1Q99742 590 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 ARV1Q9H2C2 271 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 GSTO2Q9H4Y5 243 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 BCAS3Q9H6U6 928 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF160Q9HCG1 818 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 LIN7CQ9NUP9 197 aaKnown RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 PPP1R14DQ9NXH3 145 aa5.15□□□□□ -1.58
PTPRB-202ENST00000334414 MRPL15Q9P015 296 aaKnown RBP5.15□□□□□ -1.58
PTPRB-202ENST00000334414 PADI3Q9ULW8 664 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms