RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DMTNQ08495 405 aa24.42■■□□□ 1.5
ATPAF1-201ENST00000329231 ALKBH2Q6NS38 261 aa24.42■■□□□ 1.5
ATPAF1-201ENST00000329231 NANOGP8Q6NSW7 305 aa24.42■■□□□ 1.5
ATPAF1-201ENST00000329231 CPLX4Q7Z7G2 160 aa24.42■■□□□ 1.5
ATPAF1-201ENST00000329231 NANOGQ9H9S0 305 aa24.42■■□□□ 1.5
ATPAF1-201ENST00000329231 NGBQ9NPG2 151 aa24.42■■□□□ 1.5
ATPAF1-201ENST00000329231 A0A1B0GWA3 101 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 PNMTP11086 282 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 COX5AP20674 150 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 IGHV1-2P23083 117 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 HTR2AP28223 471 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 NTF4P34130 210 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 PCGF2P35227 344 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 TAB1Q15750 504 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 DEFB113Q30KQ7 82 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 CASP12Q6UXS9 341 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 MFSD8Q8NHS3 518 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 LRRC58Q96CX6 371 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 PLPPR2Q96GM1 343 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 PIF1Q9H611 641 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 TMEM27Q9HBJ8 222 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 SELENONQ9NZV5 590 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 ARMCX1Q9P291 453 aa24.41■■□□□ 1.5
ATPAF1-201ENST00000329231 M0QX08 132 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 MRASO14807 208 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 VAMP5O95183 116 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 IGHV3-9P01782 118 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 ALG10BQ5I7T1 473 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 INTS11Q5TA45 600 aaKnown RBP24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 FAM91A1Q658Y4 838 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 REP15Q6BDI9 236 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 TMEM225Q6GV28 225 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 ULK3Q6PHR2 472 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 C5orf46Q6UWT4 87 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 SSX8Q7RTT4 187 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 PATL1Q86TB9 770 aaKnown RBP24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 RANBP3LQ86VV4 465 aaPredicted RBP24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 SNX32Q86XE0 403 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 SMYD1Q8NB12 490 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 OR9K2Q8NGE7 335 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 OR8J3Q8NGG0 315 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 UBTD1Q9HAC8 227 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 ASB6Q9NWX5 421 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 MALT1Q9UDY8 824 aa24.4■■□□□ 1.5
ATPAF1-201ENST00000329231 SNX3O60493 162 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 C8BP07358 591 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 CD53P19397 219 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 GGT1P19440 569 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 EGR4Q05215 589 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 ACKR1Q16570 336 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 GPAT4Q86UL3 456 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 ZNF433Q8N7K0 673 aaPredicted RBP24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 PCYOX1LQ8NBM8 494 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 TMEM45BQ96B21 275 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 SLC47A1Q96FL8 570 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 ECSITQ9BQ95 431 aa24.39■■□□□ 1.49
ATPAF1-201ENST00000329231 LOC100653049A0A140TA62 436 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 KRT34O76011 436 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 GTF2E2P29084 291 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 RPS5P46782 204 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 GZMMP51124 257 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 OR1Q1Q15612 314 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 STK11Q15831 433 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 VMACQ2NL98 169 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 ZNF704Q6ZNC4 412 aaPredicted RBP24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 P2RY8Q86VZ1 359 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 SLC25A36Q96CQ1 311 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 MUCL1Q96DR8 90 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 PTDSS2Q9BVG9 487 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 PRR14Q9BWN1 585 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 BEX4Q9NWD9 120 aaPredicted RBP24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 GID8Q9NWU2 228 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 UPB1Q9UBR1 384 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 RASD1Q9Y272 281 aa24.38■■□□□ 1.49
ATPAF1-201ENST00000329231 F8P00451 2351 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 FTCDNL1E5RQL4 147 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 FXYD1O00168 92 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 OR2T1O43869 369 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 LGI1O95970 557 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 OPN1SWP03999 348 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 P2RY4P51582 365 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 FAPQ12884 760 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 DUSP7Q16829 419 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 RABL3Q5HYI8 236 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 TIMM23BQ5SRD1 257 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 C20orf204Q6ZNR8 217 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 RP9Q8TA86 221 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 RNF217Q8TC41 542 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 SLC26A7Q8TE54 656 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 SLC38A4Q969I6 547 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 PIGTQ969N2 578 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 KTI12Q96EK9 354 aaPredicted RBP24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 ESRP2Q9H6T0 727 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 TAS2R16Q9NYV7 291 aa24.37■■□□□ 1.49
ATPAF1-201ENST00000329231 A0A0B4J2E0 115 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 A0A1B0GX12 115 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 CIB4A0PJX0 185 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 CCT8L1PA6NM43 557 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 PPA1Q15181 289 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 FAM69AQ5T7M9 428 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms