RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 RNF144AP50876 292 aaPredicted RBP12□□□□□ -0.49
CPNE1-201ENST00000317677 HSD11B2P80365 405 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 PGBD2Q6P3X8 592 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 GUSBP11Q6P575 273 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 PODNL1Q6PEZ8 512 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF574Q6ZN55 896 aaPredicted RBP12□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF595Q8IYB9 648 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 MORN4Q8NDC4 146 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 OR8D4Q8NGM9 314 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 OR2I1PQ8NGU4 316 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 LOXL4Q96JB6 756 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 PRRC1Q96M27 445 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 STACQ99469 402 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 SAP130Q9H0E3 1048 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 DUSP22Q9NRW4 184 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 LANCL2Q9NS86 450 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 CUTCQ9NTM9 273 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 SEMA4GQ9NTN9 838 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 NLGN3Q9NZ94 848 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 SLC9A8Q9Y2E8 581 aa12□□□□□ -0.49
CPNE1-201ENST00000317677 A0A1W2PRQ8 180 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 M0R129 80 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 FAAHO00519 579 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF749O43361 778 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 GATCO43716 136 aaKnown RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 OR10H2O60403 315 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 NKX2-2O95096 273 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 AGR2O95994 175 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 CLPSP04118 112 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 GNSP15586 552 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 APEX1P27695 318 aaKnown RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 OR1D4P47884 311 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 NUDT6P53370 316 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 SSTP61278 116 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 EEF1A1P68104 462 aaKnown RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PSG6Q00889 435 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ETFDHQ16134 617 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 HLA-BQ31612 363 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PLA1AQ53H76 456 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 DCST1Q5T197 706 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 FCRLBQ6BAA4 426 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 FIGNL1Q6PIW4 674 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 HSD17B13Q7Z5P4 300 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PLXDC1Q8IUK5 500 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 OR11H7Q8NGC8 314 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 TMEM163Q8TC26 289 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PIGKQ92643 395 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 DIO2Q92813 273 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PHF21AQ96BD5 680 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 OR2M2Q96R28 347 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 GFM1Q96RP9 751 aaKnown RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 GPA33Q99795 319 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 MTHFD2LQ9H903 347 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 DHCR7Q9UBM7 475 aaKnown RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ATXN7L1Q9ULK2 861 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 TMCC3Q9ULS5 477 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 CFAP54Q96N23 3096 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PATE3B3GLJ2 98 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 H0YIG0 161 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PEX12O00623 359 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 CDRT1O95170 752 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ECDO95905 644 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ADAP00813 363 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 IGKV1D-16P01601 117 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 CALCRP30988 508 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 GABRA3P34903 492 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 AVPR1BP47901 424 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF81P51508 661 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF155Q12901 538 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 GPR68Q15743 365 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 PEAR1Q5VY43 1037 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-201ENST00000317677 MEDAGQ5VYS4 303 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZCCHC12Q6PEW1 402 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 NPSR1Q6W5P4 371 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF730Q6ZMV8 503 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 TTLL10Q6ZVT0 673 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 KRT74Q7RTS7 529 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 CCDC36Q8IYA8 594 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 CARFQ8N187 725 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF619Q8N2I2 560 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 COX18Q8N8Q8 333 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 OR4N2Q8NGD1 307 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 TINAGQ9UJW2 476 aa11.99□□□□□ -0.49
CPNE1-201ENST00000317677 ZAR1LA6NP61 321 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 SELENOFO60613 162 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 EVX1P49640 407 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 AGFG1P52594 562 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ZNF136P52737 540 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ATP12AP54707 1039 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 SKP1P63208 163 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 SPEM2Q0P670 501 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 STX4Q12846 297 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 NCF4Q15080 339 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 PTGES3Q15185 160 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 SPHARQ15513 63 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 C3orf38Q5JPI3 329 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 WDR74Q6RFH5 385 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 ZER1Q7Z7L7 766 aa11.98□□□□□ -0.49
CPNE1-201ENST00000317677 MEX3DQ86XN8 651 aaKnown RBP11.98□□□□□ -0.49
CPNE1-201ENST00000317677 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms