RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SEC22CQ9BRL7 303 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 MRI1Q9BV20 369 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 TRIM2Q9C040 744 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 TWSG1Q9GZX9 223 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 POT1Q9NUX5 634 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 MGAT4CQ9UBM8 478 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 FOXJ3Q9UPW0 622 aa17.54■□□□□ 0.4
RTN4-201ENST00000317610 hCG_1807616A0A1W2PRN6 198 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 OR2M5A3KFT3 312 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 TNFSF14O43557 240 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 OR2A4O95047 310 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 IL5P05113 134 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 RPS21P63220 83 aaKnown RBP17.53■□□□□ 0.4
RTN4-201ENST00000317610 LGALS3BPQ08380 585 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 PON3Q15166 354 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 FCRLAQ7L513 359 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 OR51L1Q8NGJ5 315 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 SMARCD2Q92925 531 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 PTCHD1Q96NR3 888 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 OR2A7Q96R45 310 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 REG4Q9BYZ8 158 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 NOX3Q9HBY0 568 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 MED9Q9NWA0 146 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 C2orf42Q9NWW7 574 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 HCN3Q9P1Z3 774 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 CA5BQ9Y2D0 317 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 CTSVO60911 334 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 NKX2-2O95096 273 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 HRGP04196 525 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 ALDOBP05062 364 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 ZNF10P21506 573 aaPredicted RBP17.53■□□□□ 0.4
RTN4-201ENST00000317610 PSMB10P40306 273 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 RAP2BP61225 183 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 SGCGQ13326 291 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 SLC35D3Q5M8T2 416 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 ZNF626Q68DY1 528 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 VITQ6UXI7 678 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 C3P1Q6ZMU1 363 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 KANSL1Q7Z3B3 1105 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 ZNRF4Q8WWF5 429 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 SLC22A18Q96BI1 424 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 SFXN2Q96NB2 322 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 SCN2AQ99250 2005 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 APOOQ9BUR5 198 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 CA10Q9NS85 328 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 DNAJB12Q9NXW2 375 aaKnown RBP17.53■□□□□ 0.4
RTN4-201ENST00000317610 RDH8Q9NYR8 311 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 KLK11Q9UBX7 282 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 ZNF281Q9Y2X9 895 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 IER3IP1Q9Y5U9 82 aa17.53■□□□□ 0.4
RTN4-201ENST00000317610 LAMA2P24043 3122 aaKnown RBP17.52■□□□□ 0.4
RTN4-201ENST00000317610 SNRPGP15A8MWD9 76 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 SCAMP1O15126 338 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 LDB3O75112 727 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 GPR75O95800 540 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 EML2O95834 649 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 RAB40ALP0C0E4 278 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 ACSM4P0C7M7 580 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 EXOSC7Q15024 291 aaKnown RBP17.52■□□□□ 0.4
RTN4-201ENST00000317610 DEFB115Q30KQ5 88 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 ALG10BQ5I7T1 473 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 PXDC1Q5TGL8 231 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 PWWP2BQ6NUJ5 590 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 FAM198BQ6UWH4 519 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 THEM6Q8WUY1 208 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 RAB40AQ8WXH6 277 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 CTHRC1Q96CG8 243 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 CHIAQ9BZP6 476 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 TBC1D29Q9UFV1 150 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 V9GY05 133 aa17.52■□□□□ 0.4
RTN4-201ENST00000317610 ACOD1A6NK06 481 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 MCIDASD6RGH6 385 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 GALR3O60755 368 aaPredicted RBP17.52■□□□□ 0.39
RTN4-201ENST00000317610 KHDRBS3O75525 346 aaKnown RBP17.52■□□□□ 0.39
RTN4-201ENST00000317610 GUSBP08236 651 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 CT62P0C5K7 136 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 CALCBP10092 127 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 ZP3P21754 424 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 EMDP50402 254 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 P2RX1P51575 399 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 SLC25A25Q6KCM7 469 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 ABHD13Q7L211 337 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 CHMP1BQ7LBR1 199 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 NPEPL1Q8NDH3 523 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 TMEM52Q8NDY8 209 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 RGP1Q92546 391 aaPredicted RBP17.52■□□□□ 0.39
RTN4-201ENST00000317610 RNF166Q96A37 237 aaPredicted RBP17.52■□□□□ 0.39
RTN4-201ENST00000317610 ORAI1Q96D31 301 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 NMNAT2Q9BZQ4 307 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 SLC25A18Q9H1K4 315 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 PPA2Q9H2U2 334 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 LIN7BQ9HAP6 207 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 FGF22Q9HCT0 170 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 ING1Q9UK53 422 aaPredicted RBP17.52■□□□□ 0.39
RTN4-201ENST00000317610 PILRAQ9UKJ1 303 aa17.52■□□□□ 0.39
RTN4-201ENST00000317610 SELENOFO60613 162 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 KAT7O95251 611 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 IFNA16P05015 189 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 HOXD4P09016 255 aaPredicted RBP17.51■□□□□ 0.39
RTN4-201ENST00000317610 WASP42768 502 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms