RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 ZNF117Q03924 483 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
VAMP2-201ENST00000316509 GLYR1Q49A26 553 aaPredicted RBP12.7□□□□□ -0.38
VAMP2-201ENST00000316509 CDONQ4KMG0 1287 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 ALG10Q5BKT4 473 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 DMKNQ6E0U4 476 aaPredicted RBP12.7□□□□□ -0.38
VAMP2-201ENST00000316509 TSSK4Q6SA08 328 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 B3GLCTQ6Y288 498 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 KCTD20Q7Z5Y7 419 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 ANKRD37Q7Z713 158 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 JAZF1Q86VZ6 243 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 SLC35F2Q8IXU6 374 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 C10orf53Q8N6V4 93 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 OR6S1Q8NH40 331 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 SDHCQ99643 169 aaPredicted RBP12.7□□□□□ -0.38
VAMP2-201ENST00000316509 ABCB9Q9NP78 766 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 PCDHGB2Q9Y5G2 931 aa12.7□□□□□ -0.38
VAMP2-201ENST00000316509 EYSQ5T1H1 3165 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 A0A1W2PQM1 296 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 VSTM2BA6NLU5 285 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 J3QLW9 94 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 LAMTOR5O43504 91 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SLC19A2O60779 497 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ALOX12BO75342 701 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SCRG1O75711 98 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 CLUP10909 449 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ZNF19P17023 458 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 GTF2E2P29084 291 aaKnown RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ZXDAP98168 799 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 EGR4Q05215 589 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 FAM122BQ7Z309 247 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 NFAM1Q8NET5 270 aaPredicted RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 OR5L2Q8NGL0 311 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ZC3H10Q96K80 434 aaKnown RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SNX18Q96RF0 628 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 TBX5Q99593 518 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SLC26A1Q9H2B4 701 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 CTSFQ9UBX1 484 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ATXN7L1Q9ULK2 861 aaPredicted RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 FABP12A6NFH5 140 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SEC14L5O43304 696 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SPI1P17947 270 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 CENPAP49450 140 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 POLR2HP52434 150 aaKnown RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SUMO3P55854 103 aaPredicted RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 CTXN1P60606 82 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ERVK-25P63136 954 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 DNASE1L3Q13609 305 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 RPL22L1Q6P5R6 122 aaKnown RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 MARCH3Q86UD3 253 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 LAX1Q8IWV1 398 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 PRR22Q8IZ63 422 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 FAM83FQ8NEG4 500 aaPredicted RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 STK35Q8TDR2 534 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 TMEM234Q8WY98 164 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 DIRAS2Q96HU8 199 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 MIXL1Q9H2W2 232 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 RERGLQ9H628 205 aa12.69□□□□□ -0.38
VAMP2-201ENST00000316509 C19orf25Q9UFG5 118 aaPredicted RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 TP53BP1Q12888 1972 aaPredicted RBP12.69□□□□□ -0.38
VAMP2-201ENST00000316509 BLOC1S5-TXNDC5H3BN57 136 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 TMEM127O75204 238 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 SLC25A12O75746 678 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 MRPL3P09001 348 aaKnown RBP12.68□□□□□ -0.38
VAMP2-201ENST00000316509 MST1P26927 711 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 ITPKBP27987 946 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 EVI2BP34910 448 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 AQP2P41181 271 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 MAMDC2Q7Z304 686 aaPredicted RBP12.68□□□□□ -0.38
VAMP2-201ENST00000316509 TMPRSS9Q7Z410 1059 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 GRINAQ7Z429 371 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 MOSPD2Q8NHP6 518 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 PIGKQ92643 395 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 NMNAT3Q96T66 252 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 ATF6BQ99941 703 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 NEURL2Q9BR09 285 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 FBXL4Q9UKA2 621 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 ZMIZ1Q9ULJ6 1067 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 ADAM18Q9Y3Q7 739 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 NPFFR2Q9Y5X5 522 aa12.68□□□□□ -0.38
VAMP2-201ENST00000316509 SIRT4Q9Y6E7 314 aaPredicted RBP12.68□□□□□ -0.38
VAMP2-201ENST00000316509 OR6C68A6NDL8 312 aa12.67□□□□□ -0.38
VAMP2-201ENST00000316509 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
VAMP2-201ENST00000316509 IDSB3KWA1 339 aa12.67□□□□□ -0.38
VAMP2-201ENST00000316509 LRRN3E7EW58 273 aa12.67□□□□□ -0.38
VAMP2-201ENST00000316509 PRKNO60260 465 aaPredicted RBP12.67□□□□□ -0.38
VAMP2-201ENST00000316509 GPRIN2O60269 458 aa12.67□□□□□ -0.38
VAMP2-201ENST00000316509 SC5DO75845 299 aa12.67□□□□□ -0.38
VAMP2-201ENST00000316509 GATBO75879 557 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms