RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PPP1R14DQ9NXH3 145 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 B3GNT3Q9Y2A9 372 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 TRAV36DV7A0A075B6V5 113 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 FANCGO15287 622 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 CHMP24386 653 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 ARL3P36405 182 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 LILRA6Q6PI73 481 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 Q8N402 240 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 C3orf49Q96BT1 292 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 DAPP1Q9UN19 280 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 SCN2AQ99250 2005 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 MIA3Q5JRA6 1907 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 SLC1A3P43003 542 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 TXLNGYQ9BZA5 131 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 HES3Q5TGS1 186 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 ZNF355PQ9NSJ1 428 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 A0A0A6YYH2 397 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 IGHV1OR15-9A0A0B4J2B8 117 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 A6NJ64 397 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 ARAFP10398 606 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 MS4A2Q01362 244 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 UGT2A3Q6UWM9 527 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 L3MBTL4Q8NA19 623 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 PRR14Q9BWN1 585 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 POTEKPQ9BYX7 375 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 ZNF814B7Z6K7 855 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 NSA2O95478 260 aaKnown RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 IGLV3-25P01717 112 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 SELPLGQ14242 412 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 RNASE10Q5GAN6 216 aaKnown RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 FAM199XQ6PEV8 388 aaPredicted RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 PPT2Q9UMR5 302 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 A0A1W2PQ09 198 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 MEIS3P1A6NDR6 274 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 GPR171O14626 319 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 ATP1B3P54709 279 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 PLEKHN1Q494U1 663 aaPredicted RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 NDUFAF7Q7L592 441 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 LINC00346Q8IVM7 164 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 CMTM1Q8IZ96 169 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 B4DXG7 233 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 H0YIG0 161 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 LCMT2O60294 686 aaKnown RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 ZNF182P17025 639 aaPredicted RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 ETV4P43268 484 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 EIF5AL1Q6IS14 154 aaKnown RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 TMEM205Q6UW68 189 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 VASH2Q86V25 355 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 TRUB1Q8WWH5 349 aaKnown RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 DHRS4Q9BTZ2 278 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 CLEC1BQ9P126 229 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 TRBV4-1A0A0J9YWV2 114 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 TCRBV5S1A1TA0A578 114 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 ATG12O94817 140 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 ARSBP15848 533 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
RFFL-201ENST00000315249 ZNF707Q96C28 371 aaPredicted RBP12.48□□□□□ -0.41
RFFL-201ENST00000315249 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 S100A6P06703 90 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 IL2RGP31785 369 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 EMP3P54852 163 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 LGALS4P56470 323 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 P2RY14Q15391 338 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 TRILQ7L0X0 811 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 SERPINA12Q8IW75 414 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 SFTPA1Q8IWL2 248 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 OR2W5A6NFC9 320 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 AMY2AP04746 511 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 PTH2RP49190 550 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 PHOX2BQ99453 314 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 HAO2Q9NYQ3 351 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 YARS2Q9Y2Z4 477 aaKnown RBP12.47□□□□□ -0.41
RFFL-201ENST00000315249 PRAMEF4O60810 478 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 WNT4P56705 351 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 FAPQ12884 760 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 DUSP5Q16690 384 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 SARAFQ96BY9 339 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 SYT3Q9BQG1 590 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 EMC6Q9BV81 110 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 TEX101Q9BY14 249 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 PET100P0DJ07 73 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 NME1P15531 152 aaKnown RBP12.47□□□□□ -0.41
RFFL-201ENST00000315249 EVI2BP34910 448 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 RGS19P49795 217 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 MTCP1P56278 107 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 B3GNT7Q8NFL0 401 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 FKBP14Q9NWM8 211 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 LY75O60449 1722 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 IGHV3-15A0A0B4J1V0 119 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms