RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 TSPAN31Q12999 210 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 RAB11BQ15907 218 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 ARHGAP40Q5TG30 622 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 TPGS1Q6ZTW0 290 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 TMEM151BQ8IW70 566 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 ZNF707Q96C28 371 aaPredicted RBP11.46□□□□□ -0.57
EBF1-201ENST00000313708 TRMT2BQ96GJ1 504 aaKnown RBP11.46□□□□□ -0.57
EBF1-201ENST00000313708 ORAI3Q9BRQ5 295 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 CXCL16Q9H2A7 254 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 RASL12Q9NYN1 266 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 ATG4BQ9Y4P1 393 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 NME7Q9Y5B8 376 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 RTCAO00442 366 aaKnown RBP11.46□□□□□ -0.57
EBF1-201ENST00000313708 NFATC1O95644 943 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 STATHP02808 62 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 GP1BAP07359 652 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 SMIM10L2AP0DMW4 78 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 SMIM10L2BP0DMW5 78 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 SLC6A6P31641 620 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 F2RL1P55085 397 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 SNRPD1P62314 119 aaKnown RBP11.46□□□□□ -0.57
EBF1-201ENST00000313708 KIAA0040Q15053 153 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 ELAVL1Q15717 326 aaKnown RBP11.46□□□□□ -0.57
EBF1-201ENST00000313708 EIPR1Q53HC9 387 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 OR56B1Q8NGI3 324 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 OR4K13Q8NH42 304 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.57
EBF1-201ENST00000313708 AUP1Q9Y679 476 aa11.46□□□□□ -0.57
EBF1-201ENST00000313708 K7EPK0 472 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 ICOSLGO75144 302 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 SLC2A10O95528 541 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 PPP1R3DO95685 299 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 ARG1P05089 322 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 EPXP11678 715 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 RPP30P78346 268 aaKnown RBP11.46□□□□□ -0.58
EBF1-201ENST00000313708 GAS6Q14393 721 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 FAM71E2Q8N5Q1 922 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 ACTRT3Q9BYD9 372 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 C11orf49Q9H6J7 331 aa11.46□□□□□ -0.58
EBF1-201ENST00000313708 DPM1O60762 260 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ATP1B2P14415 290 aaPredicted RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 LIM2P55344 173 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 PRICKLE2Q7Z3G6 844 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 VPS25Q9BRG1 176 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ING1Q9UK53 422 aaPredicted RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 MMP24Q9Y5R2 645 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 RDH16O75452 317 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 LIMS3P0CW19 117 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 LIMS4P0CW20 117 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 RAB5AP20339 215 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 DDTP30046 118 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 CORO1AP31146 461 aaKnown RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 ZNF84P51523 738 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 EXOSC6Q5RKV6 272 aaKnown RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 SLC35F2Q8IXU6 374 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 SCGB3A2Q96PL1 93 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 DERL3Q96Q80 235 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 TMEM38AQ9H6F2 299 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 CYB5BO43169 146 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 NDUFB6O95139 128 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 PCCBP05166 539 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 CR2P20023 1033 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 FGF7P21781 194 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 RBMXP38159 391 aaKnown RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 AP1S1P61966 158 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ARFRP1Q13795 201 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 LCTLQ6UWM7 567 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 TECPR1Q7Z6L1 1165 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 APOBEC3FQ8IUX4 373 aaKnown RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 KCNJ15Q99712 375 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 SLC6A16Q9GZN6 736 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 UBQLN3Q9H347 655 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 TAF9BQ9HBM6 251 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 TEX13DA0A0J9YY54 714 aaPredicted RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 DFFBO76075 338 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 C1QCP02747 245 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 THBS1P07996 1170 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 RIDAP52758 137 aaKnown RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 POLR2LP62875 67 aaKnown RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 ZNF574Q6ZN55 896 aaPredicted RBP11.45□□□□□ -0.58
EBF1-201ENST00000313708 OLIG3Q7RTU3 272 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ZNF280BQ86YH2 543 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ZNF610Q8N9Z0 462 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 OR5AK2Q8NH90 309 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 MRI1Q9BV20 369 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 REG4Q9BYZ8 158 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 ZDHHC5Q9C0B5 715 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 TLNRD1Q9H1K6 362 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 OR52A5Q9H2C5 316 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 OR52D1Q9H346 318 aa11.45□□□□□ -0.58
EBF1-201ENST00000313708 FBRSQ9HAH7 460 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms