RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 C2orf72A6NCS6 295 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ADAM23O75077 832 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 PDE7AQ13946 482 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ADPRMQ3LIE5 342 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 Q499Y3 187 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 NXNL2Q5VZ03 156 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 OR10K2Q6IF99 312 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 HEPHL1Q6MZM0 1159 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 STEAP1BQ6NZ63 245 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 HSD11B1LQ7Z5J1 315 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 LSMEM2Q8N112 164 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 RAB3CQ96E17 227 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ADOQ96SZ5 270 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 MACROD1Q9BQ69 325 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 CBLCQ9ULV8 474 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 PRAMEF27A3QJZ7 478 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 DRGXA6NNA5 263 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 CSO75390 466 aaKnown RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 PRAMEF9Q5VWM5 478 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 TMEM59Q9BXS4 323 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 GSX2Q9BZM3 304 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 TGIF2Q9GZN2 237 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 FAM227AF5H4B4 570 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 MAGEB4O15481 346 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 SMAD6O43541 496 aaKnown RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ALX3O95076 343 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 IGHG1P01857 330 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 AOAHP28039 575 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 DSC1Q08554 894 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 DUSP6Q16828 381 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 CTSL3PQ5NE16 218 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 DPPA4Q7L190 304 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 BPHLQ86WA6 291 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 CADM3Q8N126 398 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF610Q8N9Z0 462 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 OR52H1Q8NGJ2 320 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 TMEM106AQ96A25 262 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 UBXN10Q96LJ8 280 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ADAM19Q9H013 955 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 MED20Q9H944 212 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 C17orf112F2Z3M2 114 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 FZD9O00144 591 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 F3P13726 295 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 IL2RGP31785 369 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 ERVFC1P60507 584 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 OR10R2Q8NGX6 335 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 C20orf85Q9H1P6 137 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 OR52A5Q9H2C5 316 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 UBQLN4Q9NRR5 601 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 GMPR2Q9P2T1 348 aaKnown RBP12.75□□□□□ -0.37
CLCN6-201ENST00000312413 FTSJ1Q9UET6 329 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 MOKQ9UQ07 419 aa12.75□□□□□ -0.37
CLCN6-201ENST00000312413 TMEM72A0PK05 275 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 BCKDHBP21953 392 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PCSK6P29122 969 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 HBG1P69891 147 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 HBG2P69892 147 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 GGTA1PQ4G0N0 100 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 MRPL2Q5T653 305 aaKnown RBP12.74□□□□□ -0.37
CLCN6-201ENST00000312413 RNF175Q8N4F7 328 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 C12orf76Q8N812 135 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-201ENST00000312413 YIPF5Q969M3 257 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SLAMF7Q9NQ25 335 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SLC39A9Q9NUM3 307 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CCL5P13501 91 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CPMP14384 443 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 OTX2P32243 289 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CCR6P51684 374 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CHRNEQ04844 493 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CLEC14AQ86T13 490 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PTRH1Q86Y79 214 aaKnown RBP12.74□□□□□ -0.37
CLCN6-201ENST00000312413 OR52E1Q8NGJ3 308 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PSMF1Q92530 271 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SLCO5A1Q9H2Y9 848 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ETV7Q9Y603 341 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 TRDV1A0A1B0GX56 115 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 TRABD2BA6NFA1 517 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 TGM5O43548 720 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PMS2P2O95744 297 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 F13BP05160 661 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 LPLP06858 475 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 HNRNPA2B1P22626 353 aaKnown RBP12.74□□□□□ -0.37
CLCN6-201ENST00000312413 LIPAP38571 399 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CTSCP53634 463 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 BTG1P62324 171 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SRPXP78539 464 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-201ENST00000312413 RAB33AQ14088 237 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 LTB4RQ15722 352 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ATPAF1Q5TC12 328 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms