RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TMEM247A6NEH6 219 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 SMPD2O60906 423 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 MRPL33O75394 65 aaKnown RBP17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 RAD51DO75771 328 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 GPIP06744 558 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 GGT1P19440 569 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 COPZ1P61923 177 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 GABRA6Q16445 453 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 C1orf140Q5VVS0 124 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 ALKBH2Q6NS38 261 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 PRSS57Q6UWY2 283 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 KBTBD8Q8NFY9 601 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 OR9K2Q8NGE7 335 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 STK35Q8TDR2 534 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 MUS81Q96NY9 551 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 SF3B5Q9BWJ5 86 aaKnown RBP17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 TRIM2Q9C040 744 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 TAS2R16Q9NYV7 291 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 SLC9A8Q9Y2E8 581 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 SLC25A15Q9Y619 301 aa17.44■□□□□ 0.38
PDZRN3-202ENST00000308537 SHISA9B4DS77 424 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 SOD3P08294 240 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 NCF2P19878 526 aaPredicted RBP17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 PTH2RP49190 550 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 SLC25A3Q00325 362 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 DMTNQ08495 405 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 SCARB2Q14108 478 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 PPA1Q15181 289 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 STK11Q15831 433 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 DHDDSQ86SQ9 333 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 P2RY8Q86VZ1 359 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 TSPEARQ8WU66 669 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 ANKRD27Q96NW4 1050 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 CGREF1Q99674 301 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 SMR3AQ99954 134 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 SIKE1Q9BRV8 207 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 NAA11Q9BSU3 229 aaPredicted RBP17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 RABEP2Q9H5N1 569 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 ESRP2Q9H6T0 727 aaKnown RBP17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 C12orf10Q9HB07 376 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 ASB6Q9NWX5 421 aa17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 LEF1Q9UJU2 399 aaPredicted RBP17.43■□□□□ 0.38
PDZRN3-202ENST00000308537 A0A1B0GWA3 101 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 C5orf58C9J3I9 102 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 OVOL3O00110 214 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 FBP2O00757 339 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 MFN2O95140 757 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 GZMMP51124 257 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 FAPQ12884 760 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 PGGHGQ32M88 737 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 ZNF672Q499Z4 452 aaPredicted RBP17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 CASP12Q6UXS9 341 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 NET1Q7Z628 596 aaPredicted RBP17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 EPHX4Q8IUS5 362 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 CIARTQ8N365 385 aaPredicted RBP17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 WDR31Q8NA23 367 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 MFSD8Q8NHS3 518 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 KTI12Q96EK9 354 aaPredicted RBP17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 PERPQ96FX8 193 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 PIF1Q9H611 641 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 ARMC7Q9H6L4 198 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 B3GAT1Q9P2W7 334 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 SEC14L4Q9UDX3 406 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 NDUFAF1Q9Y375 327 aa17.42■□□□□ 0.38
PDZRN3-202ENST00000308537 A0A0G2JND7 137 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 CD3EP07766 207 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 MTPNP58546 118 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 CAPRIN1Q14444 709 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 HIPK4Q8NE63 616 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 BOD1Q96IK1 185 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 KAT8Q9H7Z6 458 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 NGBQ9NPG2 151 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 ADPRHL2Q9NX46 363 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 CORO2BQ9UQ03 480 aa17.41■□□□□ 0.38
PDZRN3-202ENST00000308537 ANK3Q12955 4377 aaKnown RBP17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 A0A1W2PR80 420 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 FXYD1O00168 92 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 CLOCKO15516 846 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 TMCC2O75069 709 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 PNMTP11086 282 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 AQP1P29972 269 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 CRYBA2P53672 197 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 LGALS3BPQ08380 585 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 METTL21CQ5VZV1 264 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 CREB3L2Q70SY1 520 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 LINGO2Q7L985 606 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 SSX8Q7RTT4 187 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 YTHDF3Q7Z739 585 aaKnown RBP17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 UBE2J2Q8N2K1 259 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 GPR32P1Q8NGA4 272 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 C18orf12Q96KH6 178 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 COX4I2Q96KJ9 171 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 TMEM120AQ9BXJ8 343 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 PARPBPQ9NWS1 579 aa17.4■□□□□ 0.38
PDZRN3-202ENST00000308537 A0A0B4J2E0 115 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 A0A1B0GX12 115 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 EVPLLA8MZ36 301 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 ARHGEF9O43307 516 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 CD8AP01732 235 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms