RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 EOGTQ5NDL2 527 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 PRAMEF8Q5VWM4 474 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 PRAMEF7Q5VXH5 474 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 RDH10Q8IZV5 341 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 TMEM185AQ8NFB2 350 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 ADOQ96SZ5 270 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 HCAR1Q9BXC0 346 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 GSX2Q9BZM3 304 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 CDCP1Q9H5V8 836 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 PPIL1Q9Y3C6 166 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 CCDC88CQ9P219 2028 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 LIMS3P0CW19 117 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 LIMS4P0CW20 117 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 SRMP19623 302 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 HNRNPA2B1P22626 353 aaKnown RBP12.29□□□□□ -0.44
DDX54-201ENST00000306014 CCR9P51686 369 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.29□□□□□ -0.446e-10■■□□□ 13.6
DDX54-201ENST00000306014 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
DDX54-201ENST00000306014 CD163Q86VB7 1156 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 TCTE3Q8IZS6 198 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 AMER3Q8N944 861 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 ZNF680Q8NEM1 530 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 DCLRE1CQ96SD1 692 aaKnown RBP12.29□□□□□ -0.44
DDX54-201ENST00000306014 TMEM168Q9H0V1 697 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 PDE7BQ9NP56 450 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 CKAP5Q14008 2032 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 FFAR1O14842 300 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 SELENOFO60613 162 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 SDHBP21912 280 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 OR7E24Q6IFN5 339 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 SLC35D2Q76EJ3 337 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 DPY19L4Q7Z388 723 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 ZNF546Q86UE3 836 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 C12orf45Q8N5I9 185 aaPredicted RBP12.29□□□□□ -0.44
DDX54-201ENST00000306014 TSTD1Q8NFU3 115 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 FAM46BQ96A09 425 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 ZG16BQ96DA0 208 aa12.29□□□□□ -0.44
DDX54-201ENST00000306014 APOBEC3BQ9UH17 382 aaKnown RBP12.29□□□□□ -0.44
DDX54-201ENST00000306014 C14orf166Q9Y224 244 aaKnown RBP12.29□□□□□ -0.44
DDX54-201ENST00000306014 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 C17orf105B2RV13 164 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 CSTBP04080 98 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 NID1P14543 1247 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 RORAP35398 523 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 CXADRP78310 365 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 DPTQ07507 201 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 SIRT6Q8N6T7 355 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ZNF283Q8N7M2 679 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 OR6N1Q8NGY5 312 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 TMEM234Q8WY98 164 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 DHRS1Q96LJ7 313 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 BARHL1Q9BZE3 327 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 SLC38A1Q9H2H9 487 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ACOXLQ9NUZ1 547 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 QPCTLQ9NXS2 382 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ENTPD2Q9Y5L3 495 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 A0A0J9YY10 115 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 SERTM1A2A2V5 107 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ANKRD61A6NGH8 418 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 RAF1P04049 648 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 UBL4AP11441 157 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ANXA7P20073 488 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 PVALBP20472 110 aaPredicted RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 AGERQ15109 404 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 TMEM240Q5SV17 173 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 OR52I2Q8NH67 350 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 RASD2Q96D21 266 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ELOVL3Q9HB03 270 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 POLE3Q9NRF9 147 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ZNF701Q9NV72 531 aaPredicted RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 FLVCR2Q9UPI3 526 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 EP400Q96L91 3159 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 SLC16A7O60669 478 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 CXCL10P02778 98 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 CLUP10909 449 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 MAOBP27338 520 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 DLSTP36957 453 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 RBMXP38159 391 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 GPLD1P80108 840 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 GALK2Q01415 458 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 EIF2B1Q14232 305 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 TMEM31Q5JXX7 168 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 OR4Q3Q8NH05 313 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 SFXN2Q96NB2 322 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 WASH6PQ9NQA3 447 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 CBLCQ9ULV8 474 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 TEX51A0A1B0GUA7 166 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 ZNF35P13682 527 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 NR0B1P51843 470 aaKnown RBP12.28□□□□□ -0.44
DDX54-201ENST00000306014 SPOCK1Q08629 439 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 NSDHLQ15738 373 aa12.28□□□□□ -0.44
DDX54-201ENST00000306014 SLC25A35Q3KQZ1 300 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms