RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PLGP00747 810 aaPredicted RBP10.37□□□□□ -0.75
SCG2-201ENST00000305409 IFNGP01579 166 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 GABRA5P31644 462 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 CDKN2AP42771 156 aaKnown RBP10.37□□□□□ -0.75
SCG2-201ENST00000305409 GRK6P43250 576 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 RGS19P49795 217 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 CLDN6P56747 220 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 CTXN1P60606 82 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 DCDP81605 110 aaKnown RBP10.37□□□□□ -0.75
SCG2-201ENST00000305409 TMEM44Q2T9K0 475 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 ARHGAP11AQ6P4F7 1023 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 LEG1Q6P5S2 330 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 PAPD4Q6PIY7 484 aaKnown RBP10.37□□□□□ -0.75
SCG2-201ENST00000305409 PLPP5Q8NEB5 264 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 OR11A1Q9GZK7 315 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 PALMDQ9NP74 551 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 ABCB9Q9NP78 766 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 RPRD1BQ9NQG5 326 aaKnown RBP10.37□□□□□ -0.75
SCG2-201ENST00000305409 FAIMQ9NVQ4 179 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 BABAM2Q9NXR7 383 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 SRPK3Q9UPE1 567 aa10.37□□□□□ -0.75
SCG2-201ENST00000305409 CCDC163A0A0D9SF12 145 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 TRBV11-1A0A0K0K1C0 115 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 SHISA8B8ZZ34 492 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 ALOX12BO75342 701 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 EVI2BP34910 448 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 RPS27P42677 84 aaKnown RBP10.36□□□□□ -0.75
SCG2-201ENST00000305409 RANBP1P43487 201 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 EMP2P54851 167 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 TMEM91Q6ZNR0 172 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 PPP1R3BQ86XI6 285 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 SLITRK4Q8IW52 837 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 TMEM105Q8N8V8 129 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 ZNF511Q8NB15 262 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 NPEPL1Q8NDH3 523 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 SLC25A46Q96AG3 418 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 LPAR4Q99677 370 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 SRA1Q9HD15 236 aaKnown RBP10.36□□□□□ -0.75
SCG2-201ENST00000305409 MMP25Q9NPA2 562 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 PLEKHB1Q9UF11 243 aaPredicted RBP10.36□□□□□ -0.75
SCG2-201ENST00000305409 MRTO4Q9UKD2 239 aaKnown RBP10.36□□□□□ -0.75
SCG2-201ENST00000305409 B3GNT3Q9Y2A9 372 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 PEX16Q9Y5Y5 336 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 KNTC1P50748 2209 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 AHCTF1Q8WYP5 2266 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 UPK1BO75841 260 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 CXCR1P25024 350 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 HOXA6P31267 233 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 GALEQ14376 348 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 CARTPTQ16568 116 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 ALG10Q5BKT4 473 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 SPANXN2Q5MJ10 180 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 TMPRSS11AQ6ZMR5 421 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 GDPGP1Q6ZNW5 385 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 RABEPKQ7Z6M1 372 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 LYSMD2Q8IV50 215 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 ZNF440Q8IYI8 595 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 KDM8Q8N371 416 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 ARIH2OSQ8N7S6 290 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 DTX3Q8N9I9 347 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 OR52N1Q8NH53 320 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 OR5W2Q8NH69 310 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 METTL21AQ8WXB1 218 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 ASB15Q8WXK1 588 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 GFM1Q96RP9 751 aaKnown RBP10.36□□□□□ -0.75
SCG2-201ENST00000305409 CRB3Q9BUF7 120 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 LAT2Q9GZY6 243 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 COMMD3Q9UBI1 195 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 MALT1Q9UDY8 824 aa10.36□□□□□ -0.75
SCG2-201ENST00000305409 A0A087WV48 116 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 LOC110117498-PIK3R3F6TDL0 507 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 DCTN6O00399 190 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 RNF13O43567 381 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SSX4O60224 188 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 PPM1BO75688 479 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 OPN1LWP04000 364 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 CELA2AP08217 269 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 AHCYP23526 432 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 PSMB10P40306 273 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 ADH7P40394 386 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 RUNX1T1Q06455 604 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 RPL18Q07020 188 aaKnown RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 CD300CQ08708 224 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SIGLEC14Q08ET2 396 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 OXA1LQ15070 435 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 INPP5JQ15735 1006 aaPredicted RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 DPY19L2P2Q6ZN68 376 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 ZNF441Q8N8Z8 693 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 POC5Q8NA72 575 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 LSM14AQ8ND56 463 aaKnown RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 NEIL3Q8TAT5 605 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SLC35B4Q969S0 331 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SDHCQ99643 169 aaPredicted RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 NRIP3Q9NQ35 241 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 TIGARQ9NQ88 270 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 ZNF229Q9UJW7 825 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 COPS3Q9UNS2 423 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms