RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 C8orf89P0DMQ9 161 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 HTR2CP28335 458 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 RAB28P51157 221 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TOR2AQ5JU69 321 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CGB2Q6NT52 195 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ANKRD16Q6P6B7 361 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.789e-12■■□□□ 12.7
MECP2-201ENST00000303391 BPIFA2Q96DR5 249 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 UBQLN3Q9H347 655 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ZNF541Q9H0D2 1346 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 A0A087WUU8 490 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 FAM155AB1AL88 458 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 I6L893 689 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 TRAPPC6AO75865 159 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CPEP16870 476 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TGM1P22735 817 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CNKSR3Q6P9H4 555 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 SERINC2Q96SA4 455 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 SLC25A18Q9H1K4 315 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ZNF160Q9HCG1 818 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CNIH4Q9P003 139 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 LAMB2P55268 1798 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 SNCGO76070 127 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 EPHA1P21709 976 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CYP27C1Q4G0S4 372 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 NAGSQ8N159 534 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 DTX3Q8N9I9 347 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CMTM3Q96MX0 182 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 PCYT2Q99447 389 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ZNF331Q9NQX6 463 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 YARS2Q9Y2Z4 477 aaKnown RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 DIDO1Q9BTC0 2240 aaKnown RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 SCN1AP35498 2009 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TGM5O43548 720 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 GRPRP30550 384 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 NRLP54845 237 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 SIRPAP78324 504 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 C18orf63Q68DL7 685 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 MEX3BQ6ZN04 569 aaKnown RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 HLA-CQ95604 372 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 KCTD3Q9Y597 815 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ATP1B3P54709 279 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 DLX2Q07687 328 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 VAMP3Q15836 100 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CSNK1A1LQ8N752 337 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 PDLIM5Q96HC4 596 aaKnown RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 OR8D2Q9GZM6 311 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 CRLF2Q9HC73 371 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 PCDHGA6Q9Y5G7 932 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 FOXE1O00358 373 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 KCNJ5P48544 419 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 EMP2P54851 167 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 P2RX3P56373 397 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TMEM183BQ1AE95 376 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TP53I3Q53FA7 332 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 FCRLAQ7L513 359 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TECPR1Q7Z6L1 1165 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TMEM59Q9BXS4 323 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 DDX31Q9H8H2 851 aaKnown RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 BCO1Q9HAY6 547 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 F5P12259 2224 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 NPIPA5A0A0B4J1W7 369 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 C7orf72A4D263 438 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 OGFOD3Q6PK18 319 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 SLC35B4Q969S0 331 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ZMYND19Q96E35 227 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 OR7D2Q96RA2 312 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 GAB2Q9UQC2 676 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ZCWPW2A0A1B0GU75 182 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 H2AFB1P0C5Y9 115 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 PREPP48147 710 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 TPPP2P59282 170 aa10.2□□□□□ -0.78
MECP2-201ENST00000303391 ELAVL3Q14576 367 aaKnown RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 BSCL2Q96G97 398 aaPredicted RBP10.2□□□□□ -0.78
MECP2-201ENST00000303391 JUNDP17535 347 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 NME2P22392 152 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 CAMK2BQ13554 666 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 TTLL10Q6ZVT0 673 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 PAPOLGQ9BWT3 736 aaKnown RBP10.19□□□□□ -0.78
MECP2-201ENST00000303391 YY2O15391 372 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 SIX6O95475 246 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 NSA2O95478 260 aaKnown RBP10.19□□□□□ -0.78
MECP2-201ENST00000303391 C8AP07357 584 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 THBS1P07996 1170 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 ADIRFQ15847 76 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 SFRP5Q5T4F7 317 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 KIAA0895LQ68EN5 471 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 OVCH1Q7RTY7 1134 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 ZBTB44Q8NCP5 570 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 SH3RF2Q8TEC5 729 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 CPNE4Q96A23 557 aaPredicted RBP10.19□□□□□ -0.78
MECP2-201ENST00000303391 MYEF2Q9P2K5 600 aaKnown RBP10.19□□□□□ -0.78
MECP2-201ENST00000303391 FBXL2Q9UKC9 423 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 SLC9B1P1A6NJY1 282 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 E5RGE8 158 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 BOLLQ8N9W6 283 aaKnown RBP10.19□□□□□ -0.78
MECP2-201ENST00000303391 OR6M1Q8NGM8 313 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 PHYHIPLQ96FC7 376 aa10.19□□□□□ -0.78
MECP2-201ENST00000303391 TMEM38AQ9H6F2 299 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms