RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SAP130Q9H0E3 1048 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 NT5DC2Q9H857 520 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 STARD5Q9NSY2 213 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 FBXL2Q9UKC9 423 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 SERTM2A0A1B0GWG4 89 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 GPR32O75388 356 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 YIF1AO95070 293 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 THBS1P07996 1170 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 RAB40ALP0C0E4 278 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 SLC35E2BP0CK96 405 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 TAGLN2P37802 199 aaKnown RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 SPINT3P49223 89 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 EPHA5P54756 1037 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 CDK5R2Q13319 367 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 MEP1BQ16820 701 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 PLAC9Q5JTB6 97 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 AVPI1Q5T686 147 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 B3GNT7Q8NFL0 401 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 RAB40AQ8WXH6 277 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 CDS1Q92903 461 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 MUL1Q969V5 352 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 NECTIN4Q96NY8 510 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 TMX2-CTNND1H3BSU7 103 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 TNFRSF10AO00220 468 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 EIF3FO00303 357 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 MRPS14O60783 128 aaKnown RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 ADH4P08319 380 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 DBPQ10586 325 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 LRRC28Q86X40 367 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 LSMEM2Q8N112 164 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 OR52R1Q8NGF1 315 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 ARSGQ96EG1 525 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 OR2M2Q96R28 347 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 ATF6BQ99941 703 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 NMES1Q9C002 83 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 MARCH4Q9P2E8 410 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 ZMAT5Q9UDW3 170 aaKnown RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 EMC9Q9Y3B6 208 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 CDHR4A6H8M9 788 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 NSA2O95478 260 aaKnown RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 HSD17B1P14061 328 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 GM2AP17900 193 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 KEAP1Q14145 624 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 CRMP1Q14194 572 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 SLC46A3Q7Z3Q1 461 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 SLC35F3Q8IY50 421 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 MOCOSQ96EN8 888 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 MAOBP27338 520 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 NPSR1Q6W5P4 371 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 GAREM2Q75VX8 874 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 CATSPERDQ86XM0 798 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 UMODL1-AS1Q8N2C9 162 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 OR1S2Q8NGQ3 325 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 HSD17B8Q92506 261 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 FGGYQ96C11 551 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 WWTR1Q9GZV5 400 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 RGS11O94810 467 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 RPA2P15927 270 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 LSAMPQ13449 338 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 MEPCEQ7L2J0 689 aaKnown RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 FCRLAQ7L513 359 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 OR1M1Q8NGA1 313 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 OR52H1Q8NGJ2 320 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 OR5B3Q8NH48 314 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 FAM3CQ92520 227 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 RAB3CQ96E17 227 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 MOB1AQ9H8S9 216 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 BARX1Q9HBU1 254 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-201ENST00000302528 INPP5EQ9NRR6 644 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 PGAP2Q9UHJ9 254 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 BTNL2Q9UIR0 455 aa9.7□□□□□ -0.86
CLIP1-201ENST00000302528 BCL9LQ86UU0 1499 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 MROH6A6NGR9 719 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 LGALS8O00214 317 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 NXPH2O95156 264 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 NXPH3O95157 252 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 DDAH2O95865 285 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF266Q14584 549 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 WBP2NLQ6ICG8 309 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 OR5M10Q6IEU7 315 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 OPN5Q6U736 354 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 OR5AR1Q8NGP9 310 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 TCTN2Q96GX1 697 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 DCBLD2Q96PD2 775 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 PLK3Q9H4B4 646 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 METTL17Q9H7H0 456 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-201ENST00000302528 CACNG3O60359 315 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 LDB3O75112 727 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ZFAND5O76080 213 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 MT-ND4LP03901 98 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 RBMS2Q15434 407 aaKnown RBP9.69□□□□□ -0.86
CLIP1-201ENST00000302528 SERPINA11Q86U17 422 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLIP1-201ENST00000302528 FCRL1Q96LA6 429 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF300Q96RE9 604 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms