RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 Q6ZPB1 254 aaPredicted RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 SEM1Q6ZVN7 128 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 KIF18BQ86Y91 864 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 WDFY1Q8IWB7 410 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 UBQLNLQ8IYU4 475 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 GHDCQ8N2G8 530 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 ZNF843Q8N446 348 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR10G2Q8NGC3 310 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR10D3Q8NH80 312 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR2V1Q8NHB1 315 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CPT1CQ8TCG5 803 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 GIPC3Q8TF64 312 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SMPDL3BQ92485 455 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OSTF1Q92882 214 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 DDIT4LQ96D03 193 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 FAM46AQ96IP4 442 aaKnown RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 UCN2Q96RP3 112 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CIB1Q99828 191 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 TUBA1CQ9BQE3 449 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OSBPL10Q9BXB5 764 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 DGCR6LQ9BY27 220 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 GABARAPL1Q9H0R8 117 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 PNPLA3Q9NST1 481 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 TAS2R5Q9NYW4 299 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 PDP1Q9P0J1 537 aaPredicted RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 SPTA1P02549 2419 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 H0YHG0 523 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 SMAD9O15198 467 aaKnown RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 GPR37O15354 613 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SEC14L5O43304 696 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CXCL13O43927 109 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR10H3O60404 316 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CCNB2O95067 398 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 HPRP00739 348 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 IGFBP1P08833 259 aaPredicted RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 TFPIP10646 304 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 EDN3P14138 238 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 ENPP1P22413 925 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 UQCRC1P31930 480 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 IFNA8P32881 189 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 NTF4P34130 210 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 IDUAP35475 653 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CARD18P57730 90 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 RAC3P60763 192 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SRYQ05066 204 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SLC34A1Q06495 639 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR7A5Q15622 319 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
RFX3-201ENST00000302303 OGFRL1Q5TC84 451 aaPredicted RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 FBXW10Q5XX13 1052 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 KDM4DQ6B0I6 523 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 C5orf46Q6UWT4 87 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 DOLPP1Q86YN1 238 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CCDC103Q8IW40 242 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 RPRMLQ8N4K4 120 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 TMEM99Q8N816 258 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 LRRC75AQ8NAA5 344 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 AQP11Q8NBQ7 271 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 ICA1LQ8NDH6 482 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR5M9Q8NGP3 310 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 ZPLD1Q8TCW7 415 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SGTBQ96EQ0 304 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 DTNBP1Q96EV8 351 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 TNFRSF13CQ96RJ3 184 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SELENONQ9NZV5 590 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 B3GAT1Q9P2W7 334 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 TMCC3Q9ULS5 477 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SIGLEC7Q9Y286 467 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 IGHV3-15A0A0B4J1V0 119 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 HTR3EA5X5Y0 456 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 M0R082 166 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 SULT2B1O00204 365 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 PLPP3O14495 311 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 MITFO75030 526 aaPredicted RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 E2F6O75461 281 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 AQP8O94778 261 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 AKR7A3O95154 331 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 AHSA1O95433 338 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 TGM6O95932 706 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 MT-ATP6P00846 226 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 ALPLP05186 524 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 POU2F1P14859 743 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 ZNF23P17027 643 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 FPR3P25089 353 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 PEX2P28328 305 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 EPHA2P29317 976 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 GRPRP30550 384 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 PTGS2P35354 604 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 POLR2IP36954 125 aaKnown RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 GTF3C1Q12789 2109 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 TSPAN31Q12999 210 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 OTUD3Q5T2D3 398 aaPredicted RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 HBMQ6B0K9 141 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 PPP4R4Q6NUP7 873 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 KLHL17Q6TDP4 642 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 STK32CQ86UX6 486 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 HIPK1Q86Z02 1210 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms