RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF250P15622 560 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 ARFIP1P53367 373 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 TPBGQ13641 420 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 MAPK14Q16539 360 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 PCGF3Q3KNV8 242 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 LINC00469Q8N7U9 141 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 DNAJA4Q8WW22 397 aaPredicted RBP12.98□□□□□ -0.33
SDC2-201ENST00000302190 UPRTQ96BW1 309 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 CMKLR1Q99788 373 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.98□□□□□ -0.33
SDC2-201ENST00000302190 EVA1BQ9NVM1 165 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 DUX4Q9UBX2 424 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 MN1Q10571 1320 aaPredicted RBP12.98□□□□□ -0.33
SDC2-201ENST00000302190 ANKRD36A6QL64 1941 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 PRAMEF27A3QJZ7 478 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 SURF4O15260 269 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 EFR3AQ14156 821 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 MLF2Q15773 248 aaPredicted RBP12.98□□□□□ -0.33
SDC2-201ENST00000302190 DECR1Q16698 335 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 OR10H5Q8NGA6 315 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 SYNPRQ8TBG9 265 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 Q96M85 177 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 SLC6A18Q96N87 628 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 TMEM43Q9BTV4 400 aa12.98□□□□□ -0.33
SDC2-201ENST00000302190 A0A0A6YYJ9 748 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 PLA2G10O15496 165 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 TNFP01375 233 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 SBK2P0C263 348 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 B2MP61769 119 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 PPP2CBP62714 309 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 PPP2CAP67775 309 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 KLHL26Q53HC5 615 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 KDM8Q8N371 416 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 AVL9Q8NBF6 648 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 LMX1AQ8TE12 382 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.97□□□□□ -0.334e-8■■□□□ 13.4
SDC2-201ENST00000302190 UBQLN2Q9UHD9 624 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ZDBF2Q9HCK1 2354 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 C5orf51A6NDU8 294 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 IDSB3KWA1 339 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 GPR75O95800 540 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 SOD1P00441 154 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ZNF823P16415 610 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 UGT2B7P16662 529 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 GABRB1P18505 474 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 CBX5P45973 191 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 FXYD6P3P58550 94 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ACTC1P68032 377 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ACTA1P68133 377 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 TNFRSF17Q02223 184 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 LRRC56Q8IYG6 542 aaPredicted RBP12.97□□□□□ -0.33
SDC2-201ENST00000302190 LHFPL5Q8TAF8 219 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ZNF346Q9UL40 294 aaKnown RBP12.97□□□□□ -0.33
SDC2-201ENST00000302190 CIB4A0PJX0 185 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 SEMA7AO75326 666 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 GZMKP49863 264 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ADAMTSL4Q6UY14 1074 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 CREB3L2Q70SY1 520 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 DPY19L4Q7Z388 723 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 SFTPA2Q8IWL1 248 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 FBLIM1Q8WUP2 373 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ASB12Q8WXK4 309 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 FAM3CQ92520 227 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 DVL3Q92997 716 aaPredicted RBP12.97□□□□□ -0.33
SDC2-201ENST00000302190 SERINC2Q96SA4 455 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 DDOQ99489 341 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ATF6BQ99941 703 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
SDC2-201ENST00000302190 ENKD1Q9H0I2 346 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 TSPAN10Q9H1Z9 355 aaPredicted RBP12.97□□□□□ -0.33
SDC2-201ENST00000302190 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
SDC2-201ENST00000302190 B3GAT2Q9NPZ5 323 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 PRDM7Q9NQW5 492 aa12.97□□□□□ -0.33
SDC2-201ENST00000302190 ARHGDIBP52566 201 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 PCBP4P57723 403 aaKnown RBP12.96□□□□□ -0.33
SDC2-201ENST00000302190 GRM7Q14831 915 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 ELP2Q6IA86 826 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 POGLUT1Q8NBL1 392 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 FAM174AQ8TBP5 190 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 CHAC2Q8WUX2 184 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 GDF15Q99988 308 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 ASB6Q9NWX5 421 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 SLC6A5Q9Y345 797 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 CREBL2O60519 120 aaPredicted RBP12.96□□□□□ -0.33
SDC2-201ENST00000302190 DNAJB6O75190 326 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 PLATP00750 562 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.33
SDC2-201ENST00000302190 SIRPAP78324 504 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 RUNX2Q13950 521 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 FGL2Q14314 439 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms