RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TSPAN11A1L157 253 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 RIIAD1A6NNX1 92 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 IDSB3KWA1 339 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 RASGRP1O95267 797 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 LYPD3O95274 346 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 EDNRAP25101 427 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ACTC1P68032 377 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ACTA1P68133 377 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 PRR5P85299 388 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SCRN3Q0VDG4 424 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 KRT33BQ14525 404 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 RBMS2Q15434 407 aaKnown RBP10.01□□□□□ -0.81
ZNF558-201ENST00000301475 FAM111BQ6SJ93 734 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 UNQ9370/PRO34162Q6UXP9 181 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM17Q86X19 198 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 NPAS4Q8IUM7 802 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TNFAIP8L1Q8WVP5 186 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM239Q8WW34 195 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 WNT2BQ93097 391 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 HAVCR1Q96D42 359 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 DTD2Q96FN9 168 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF75AQ96N20 296 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 C2orf42Q9NWW7 574 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SPG21Q9NZD8 308 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 GNG8Q9UK08 70 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 LRIT2A6NDA9 550 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 ANKRD61A6NGH8 418 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 EMC8O43402 210 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 GLAP06280 429 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 UBBP0CG47 229 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 UBCP0CG48 685 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 ERGP11308 486 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 F3P13726 295 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 CNR1P21554 472 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 AKR1C2P52895 323 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 GMFBP60983 142 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 RPS27AP62979 156 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 UBA52P62987 128 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 AKR1C1Q04828 323 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 RAB11FIP2Q7L804 512 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 ADIPOR2Q86V24 386 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 DCUN1D3Q8IWE4 304 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM185AQ8NFB2 350 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 RGP1Q92546 391 aaPredicted RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 CDS1Q92903 461 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 TCEAL4Q96EI5 215 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 S100A16Q96FQ6 103 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 PAWRQ96IZ0 340 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 MENTQ9BUN1 341 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 CHST6Q9GZX3 395 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 DPEP2Q9H4A9 486 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 KRCC1Q9NPI7 259 aaPredicted RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 HAO2Q9NYQ3 351 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF230Q9UIE0 474 aaPredicted RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 INSL5Q9Y5Q6 135 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 TICRRQ7Z2Z1 1910 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 EML5Q05BV3 1969 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 IGKV1-8A0A0C4DH67 115 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 LINC00587B1AMM8 73 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF879B4DU55 563 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 DISC1C4P0D8 188 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 SPINT1O43278 529 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 SULT1B1O43704 296 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 APOC1P02654 83 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 GP1BAP07359 652 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 MGMTP16455 207 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 NDUFS1P28331 727 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 TRA2BP62995 288 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 PCGF3Q3KNV8 242 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 C11orf88Q6PI97 169 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 PARS2Q7L3T8 475 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 CAMKVQ8NCB2 501 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 MS4A4EQ96PG1 132 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 TSNAXQ99598 290 aaKnown RBP10□□□□□ -0.81
ZNF558-201ENST00000301475 IL21RQ9HBE5 538 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM138Q9NPI0 162 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 CALML5Q9NZT1 146 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 LRFN2Q9ULH4 789 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 SCN2AQ99250 2005 aa10□□□□□ -0.81
ZNF558-201ENST00000301475 THSD7BQ9C0I4 1608 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CXorf51AA0A1B0GTR3 108 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 TRAPPC13A5PLN9 417 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 LEFTY2O00292 366 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 RCBTB2O95199 551 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 PAPLNO95428 1278 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 SELPP16109 830 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF3P17036 446 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 LUMP51884 338 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 POLR2GP62487 172 aaKnown RBP eCLIP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 UBE2IP63279 158 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CSNK1G2P78368 415 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 LY6G6FQ5SQ64 297 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 HAGHLQ6PII5 290 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 SDR9C7Q8NEX9 313 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 OR2L2Q8NH16 312 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 TFGQ92734 400 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 BPIFA2Q96DR5 249 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 MEPEQ9NQ76 525 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CES1P1Q9UKY3 287 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms