RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TMPRSS11FQ6ZWK6 438 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 ZNF431Q8TF32 576 aaPredicted RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 DNAJA4Q8WW22 397 aaPredicted RBP20.1■□□□□ 0.81
TPM4-201ENST00000300933 MESP1Q9BRJ9 268 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 PRDM6Q9NQX0 595 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 ZNF222Q9UK12 451 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 ADAM18Q9Y3Q7 739 aa20.1■□□□□ 0.81
TPM4-201ENST00000300933 SLC22A5O76082 557 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 OR7A10O76100 309 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 EVX1P49640 407 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 ATP12AP54707 1039 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 IGLV3-21P80748 117 aaPredicted RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 FUT7Q11130 342 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 DSG2Q14126 1118 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 CD226Q15762 336 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 BCL2L15Q5TBC7 163 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 PRPF38BQ5VTL8 546 aaKnown RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 FAAH2Q6GMR7 532 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 APOOLQ6UXV4 268 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 GRAMD2AQ8IUY3 354 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 LNX2Q8N448 690 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 ZSCAN1Q8NBB4 408 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 OR1L3Q8NH93 324 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 ZNF285Q96NJ3 590 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 ATF6BQ99941 703 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 NXF5Q9H1B4 397 aaKnown RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 LANCL2Q9NS86 450 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 RPS6KB2Q9UBS0 482 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 IGHV1OR21-1A0A087WYE8 117 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 A0A0A6YYJ9 748 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 AKAP8O43823 692 aaKnown RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 FMO6PO60774 539 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 RCBTB2O95199 551 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 CSF2RBP32927 897 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 PER3P56645 1201 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 FGFBP1Q14512 234 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 GRM7Q14831 915 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 QSOX2Q6ZRP7 698 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 OR4K13Q8NH42 304 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 PRO3102Q9H379 93 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 FN3KQ9H479 309 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 CCDC86Q9H6F5 360 aaKnown RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 MCCC2Q9HCC0 563 aa20.09■□□□□ 0.81
TPM4-201ENST00000300933 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 EIF3KQ9UBQ5 218 aaKnown RBP20.09■□□□□ 0.81
TPM4-201ENST00000300933 CACNA1EQ15878 2313 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 A0A1B0GVC2 190 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 SHISA3A0PJX4 238 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 A6NIN4 97 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 PTP4A3O75365 173 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 SDHBP21912 280 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 HSD17B7P56937 341 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 TPBGQ13641 420 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 FHL1Q13642 323 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 SF3A2Q15428 464 aaKnown RBP20.08■□□□□ 0.81
TPM4-201ENST00000300933 TEX261Q6UWH6 196 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 MEPCEQ7L2J0 689 aaKnown RBP20.08■□□□□ 0.81
TPM4-201ENST00000300933 OR4C6Q8NH72 309 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 U3KQ87 197 aa20.08■□□□□ 0.81
TPM4-201ENST00000300933 TRAV6A0A075B6T7 132 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 C4orf47A7E2U8 309 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 PRR23D1E9PI22 279 aaPredicted RBP20.08■□□□□ 0.8
TPM4-201ENST00000300933 NPIPB9F8W1W9 429 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 BCAT2O15382 392 aaPredicted RBP20.08■□□□□ 0.8
TPM4-201ENST00000300933 ZNF749O43361 778 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 PRR23D2P0DMB1 279 aaPredicted RBP20.08■□□□□ 0.8
TPM4-201ENST00000300933 KLHL36Q8N4N3 616 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 ZNF680Q8NEM1 530 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 SDR9C7Q8NEX9 313 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 OR5M3Q8NGP4 307 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 KISS1RQ969F8 398 aaPredicted RBP20.08■□□□□ 0.8
TPM4-201ENST00000300933 ERMAPQ96PL5 475 aaPredicted RBP20.08■□□□□ 0.8
TPM4-201ENST00000300933 TEAD3Q99594 435 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 SOSTQ9BQB4 213 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 NUDT22Q9BRQ3 303 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 MED18Q9BUE0 208 aa20.08■□□□□ 0.8
TPM4-201ENST00000300933 SERINC4A6NH21 518 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 E9PI62 339 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 ZP2Q05996 745 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 TCTE1Q5JU00 501 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 OGFOD3Q6PK18 319 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 RFLNBQ8N5W9 214 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 OR52E2Q8NGJ4 325 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 FAM174AQ8TBP5 190 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 ADOQ96SZ5 270 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 TIMP4Q99727 224 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 RTN4RQ9BZR6 473 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 POLE3Q9NRF9 147 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 MED17Q9NVC6 651 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 EXOGQ9Y2C4 368 aaKnown RBP20.07■□□□□ 0.8
TPM4-201ENST00000300933 FER1L5A0AVI2 2057 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 CACNA1CQ13936 2221 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 PAHP00439 452 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 PTGS2P35354 604 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 STARD6P59095 220 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 ZNF141Q15928 474 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 ZNF322Q6U7Q0 402 aaPredicted RBP20.07■□□□□ 0.8
TPM4-201ENST00000300933 RPTNQ6XPR3 784 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 PHOSPHO1Q8TCT1 267 aa20.07■□□□□ 0.8
TPM4-201ENST00000300933 TRIM2Q9C040 744 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms