RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RNF44Q7L0R7 432 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 OR51S1Q8NGJ8 323 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ATOH1Q92858 354 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF558Q96NG5 402 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 NKX6-2Q9C056 277 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 DPEP2Q9H4A9 486 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 V9GY05 133 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 KLF4O43474 513 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 B3GALNT1O75752 331 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 PCDH8O95206 1070 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 IFNGP01579 166 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 RPS27P42677 84 aaKnown RBP13.5□□□□□ -0.25
COL6A2-201ENST00000300527 MESP2Q0VG99 397 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 LIN54Q6MZP7 749 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 SEZ6L2Q6UXD5 910 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 SHISA5Q8N114 240 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF75AQ96N20 296 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 PRSS27Q9BQR3 290 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 OR5V1Q9UGF6 321 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 PIN1P1O15428 100 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 PRAMEF2O60811 474 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 CDC123O75794 336 aaPredicted RBP13.5□□□□□ -0.25
COL6A2-201ENST00000300527 RBBP9O75884 186 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 HIST1H1CP16403 213 aaKnown RBP13.5□□□□□ -0.25
COL6A2-201ENST00000300527 TAS2R20P59543 309 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 NTHL1P78549 312 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 SLC7A9P82251 487 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 CAP1Q01518 475 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 CBLN2Q8IUK8 224 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 TCEAL8Q8IYN2 117 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 OR2AK2Q8NG84 335 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 ARRDC3Q96B67 414 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 MS4A6EQ96DS6 147 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 NMNAT3Q96T66 252 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 CNN2Q99439 309 aaKnown RBP13.5□□□□□ -0.25
COL6A2-201ENST00000300527 ZCCHC4Q9H5U6 513 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
COL6A2-201ENST00000300527 ASF1BQ9NVP2 202 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 IKZF2Q9UKS7 526 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 PLEKHM1Q9Y4G2 1056 aa13.5□□□□□ -0.25
COL6A2-201ENST00000300527 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 KCNAB3O43448 404 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 F12P00748 615 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-201ENST00000300527 GLAP06280 429 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 OR8G3PP0DMU2 310 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 TRMT12Q53H54 448 aaKnown RBP13.49□□□□□ -0.25
COL6A2-201ENST00000300527 BAIAP2L2Q6UXY1 529 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 CMIPQ8IY22 773 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 C10orf53Q8N6V4 93 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 COX18Q8N8Q8 333 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 OR4C16Q8NGL9 310 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 OR5K2Q8NHB8 316 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 RNF186Q9NXI6 227 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 HEATR5BQ9P2D3 2071 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 IGKV1-8A0A0C4DH67 115 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 OR2M5A3KFT3 312 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 OR2W5A6NFC9 320 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 GSTZ1O43708 216 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-201ENST00000300527 SC5DO75845 299 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 ANXA2P07355 339 aaKnown RBP13.49□□□□□ -0.25
COL6A2-201ENST00000300527 NDUFS1P28331 727 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF136P52737 540 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 SLC48A1Q6P1K1 146 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 ULBP3Q9BZM4 244 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 FOXJ3Q9UPW0 622 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 SIGLEC7Q9Y286 467 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 TRAV18A0A075B6X5 111 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 TRAV1-2A0A0B4J238 106 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 LINC01387J3KSC0 135 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 TBX19O60806 448 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 RPN2P04844 631 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 PON3Q15166 354 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 AMZ1Q400G9 498 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 MFSD12Q6NUT3 480 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 RAB42Q8N4Z0 105 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 SPICQ8N5J4 248 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF511Q8NB15 262 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 OR5M9Q8NGP3 310 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 SLC6A17Q9H1V8 727 aa13.49□□□□□ -0.25
COL6A2-201ENST00000300527 A0A1W2PPV9 198 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 NAP1L6A6NFF2 107 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 C4orf47A7E2U8 309 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ACOT7O00154 380 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 NDUFB6O95139 128 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ACTC1P68032 377 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ACTA1P68133 377 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 DEFB134Q4QY38 66 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TMEM64Q6YI46 380 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ZNRF4Q8WWF5 429 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 TSSK2Q96PF2 358 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 GFI1Q99684 422 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
COL6A2-201ENST00000300527 ZMAT3Q9HA38 289 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms