RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 V9GYH0 126 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 CENPVL1A0A0U1RR11 272 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 A0A1W2PPL8 197 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 SOD1P00441 154 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 HNRNPA1P09651 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASC4-201ENST00000299957 THEGLP0DJG4 465 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 GP1BBP13224 206 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 PSMB1P20618 241 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 IFITM2Q01629 132 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 FAM198BQ6UWH4 519 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 CHAC2Q8WUX2 184 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 FAM3CQ92520 227 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 MRGPRX3Q96LB0 322 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 DHCR7Q9UBM7 475 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 EPHA6Q9UF33 1036 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 TDRD6O60522 2096 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 C17orf105B2RV13 164 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 SURF4O15260 269 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 SLC43A1O75387 559 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 PIPP12273 146 aaPredicted RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 S1PR1P21453 382 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 ELOAQ14241 798 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 COL28A1Q2UY09 1125 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 TSEN54Q7Z6J9 526 aaKnown RBP12.29□□□□□ -0.44
CASC4-201ENST00000299957 OR2L8Q8NGY9 312 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 THAP6Q8TBB0 222 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 SERINC2Q96SA4 455 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 KLRF1Q9NZS2 232 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 CPNE7Q9UBL6 633 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 MAFFQ9ULX9 164 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 NEUROG3Q9Y4Z2 214 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 MGAMO43451 1857 aa12.29□□□□□ -0.44
CASC4-201ENST00000299957 FITM1A5D6W6 292 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 NPIPA5E9PKD4 350 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 CCSO14618 274 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 S100A6P06703 90 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 GABRB1P18505 474 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PRSS3P35030 304 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 ETV6P41212 452 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 GPR143P51810 404 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PPP2CBP62714 309 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PPP2CAP67775 309 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 KIAA1958Q8N8K9 716 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 KLHDC7BQ96G42 594 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 SLC25A44Q96H78 314 aaPredicted RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 SLC6A20Q9NP91 592 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 MRTO4Q9UKD2 239 aaKnown RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 NPIPA1Q9UND3 350 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 DCNP07585 359 aaKnown RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 ZNF20P17024 532 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 DCTDP32321 178 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 TNFRSF17Q02223 184 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 HTR4Q13639 388 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 RUNX2Q13950 521 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 HEPHL1Q6MZM0 1159 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 BRIX1Q8TDN6 353 aaKnown RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 C3orf49Q96BT1 292 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 GPANK1O95872 356 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PRH1P02810 166 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 CXCL3P19876 107 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 BTG2P78543 158 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PLCXD2Q0VAA5 305 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 OPCMLQ14982 345 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 DEFB133Q30KQ1 61 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 NKAPLQ5M9Q1 402 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 C12orf73Q69YU5 71 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 LRRC69Q6ZNQ3 347 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 RELL2Q8NC24 303 aaPredicted RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 RSC1A1Q92681 617 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 TRIM64A6NGJ6 449 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 DISC1C4P0D8 188 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 PEX14O75381 377 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 RAB3DO95716 219 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 C1QBP02746 253 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 SLC2A5P22732 501 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 HSD11B1P28845 292 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 OPRD1P41143 372 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 RAD52P43351 418 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 EIF2B1Q14232 305 aaKnown RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 GALEQ14376 348 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 VASNQ6EMK4 673 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 NIPAL3Q6P499 406 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 ZNF584Q8IVC4 421 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 LINC00346Q8IVM7 164 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 OR56B4Q8NH76 319 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 ZFAND1Q8TCF1 268 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 SFXN2Q96NB2 322 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 ELOVL3Q9HB03 270 aa12.28□□□□□ -0.44
CASC4-201ENST00000299957 CGGBP1Q9UFW8 167 aaPredicted RBP12.28□□□□□ -0.44
CASC4-201ENST00000299957 GPR179Q6PRD1 2367 aa12.27□□□□□ -0.44
CASC4-201ENST00000299957 DNAJB6O75190 326 aa12.27□□□□□ -0.44
CASC4-201ENST00000299957 ZNF35P13682 527 aa12.27□□□□□ -0.44
CASC4-201ENST00000299957 LTBQ06643 244 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms