RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 UPRTQ96BW1 309 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR5B2Q96R09 309 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR5M11Q96RB7 305 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 TMPRSS5Q9H3S3 457 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 CDH20Q9HBT6 801 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 SEMA4GQ9NTN9 838 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 TRBV4-1A0A0J9YWV2 114 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 M0QYG6 137 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 BET1O15155 118 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 GPR26Q8NDV2 337 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR9A4Q8NGU2 314 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 BCL7CQ8WUZ0 217 aaPredicted RBP13.87□□□□□ -0.19
SCN3B-201ENST00000299333 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 RASD2Q96D21 266 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 RTP4Q96DX8 246 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 TPPP3Q9BW30 176 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 DMRT3Q9NQL9 472 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 RALYQ9UKM9 306 aaKnown RBP13.87□□□□□ -0.19
SCN3B-201ENST00000299333 MYH10P35580 1976 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF623O75123 536 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR7A5Q15622 319 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 BAK1Q16611 211 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 ADPRMQ3LIE5 342 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 KCNRGQ8N5I3 272 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 OR5L2Q8NGL0 311 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 WDR92Q96MX6 357 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 SFXN2Q96NB2 322 aa13.87□□□□□ -0.19
SCN3B-201ENST00000299333 BTBD17A6NE02 478 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 PLSCR1O15162 318 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 NXPH3O95157 252 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 TK1P04183 234 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 CD79AP11912 226 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ELOCQ15369 112 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 DEFB115Q30KQ5 88 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 C15orf54Q8N8G6 183 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 OR8U1Q8NH10 309 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 CD99L2Q8TCZ2 262 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 GPR78Q96P69 363 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 GAS2L1Q99501 681 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 GMPR2Q9P2T1 348 aaKnown RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 IGLON5A6NGN9 336 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 KDM4EB2RXH2 506 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 XRCC3O43542 346 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF207O43670 478 aaKnown RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 CSO75390 466 aaKnown RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 THBS1P07996 1170 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 EPHA4P54764 986 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 VDAC3Q9Y277 283 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ACTL7AQ9Y615 435 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ABCC6O95255 1503 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 AQP7O14520 342 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ALDOCP09972 364 aaKnown RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 SPINT3P49223 89 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 AADACL3Q5VUY0 350 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 TSSK2Q96PF2 358 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 DDOQ99489 341 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 RTP3Q9BQQ7 232 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 SLCO5A1Q9H2Y9 848 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 CUTCQ9NTM9 273 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 SLC23A2Q9UGH3 650 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 MROH6A6NGR9 719 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF587BE7ETH6 402 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 KLF8O95600 359 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 VIPR2P41587 438 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 LIMK1P53667 647 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF239Q16600 458 aaKnown RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 CCL14Q16627 93 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 MPEG1Q2M385 716 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 DEFB110Q30KQ9 67 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF610Q8N9Z0 462 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 CLMPQ9H6B4 373 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 NRIP3Q9NQ35 241 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 SPHK1Q9NYA1 384 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 KPTNQ9Y664 436 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 TCHHQ07283 1943 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 OR8G3PP0DMU2 310 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 EMP3P54852 163 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 P2RX3P56373 397 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ACTBL2Q562R1 376 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 LRRC56Q8IYG6 542 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-201ENST00000299333 OR14L1PQ8NHC6 308 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 PELI2Q9HAT8 420 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 NOX4Q9NPH5 578 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 SLC6A14Q9UN76 642 aa13.86□□□□□ -0.19
SCN3B-201ENST00000299333 ANKRD30BLA7E2S9 258 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 GABARAPO95166 117 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 C1QBP02746 253 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM31Q5JXX7 168 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 CD276Q5ZPR3 534 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 STEAP1BQ6NZ63 245 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 GHSRQ92847 366 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms