RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 EIF3KQ9UBQ5 218 aaKnown RBP22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 RPS6KB2Q9UBS0 482 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 FANCMQ8IYD8 2048 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF267Q14586 743 aaPredicted RBP22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 PON3Q15166 354 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 TEX261Q6UWH6 196 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 DNAAF1Q8NEP3 725 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 MOSPD2Q8NHP6 518 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 HERVK_113Q902F9 699 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 CTHRC1Q96CG8 243 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 U3KQ87 197 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 FMO6PO60774 539 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 NKX2-2O95096 273 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 NDUFB2O95178 105 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 BTG2P78543 158 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 LGALSLQ3ZCW2 172 aaPredicted RBP22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 Q6ZTK2 550 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 PARGQ86W56 976 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 OR52I2Q8NH67 350 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 BAHD1Q8TBE0 780 aaPredicted RBP22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 HAVCR2Q8TDQ0 301 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 CLIP3Q96DZ5 547 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 MAP6Q96JE9 813 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 OBP2AQ9NY56 170 aa22.36■■□□□ 1.17
SPTSSA-201ENST00000298130 H7C1C5 153 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 OGG1O15527 345 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 SRMP19623 302 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 VEGFCP49767 419 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 ZP1P60852 638 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 LCN6P62502 163 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 NPSR1Q6W5P4 371 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 LUZP2Q86TE4 346 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 RSC1A1Q92681 617 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 NKX3-1Q99801 234 aaPredicted RBP22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 HAO2Q9NYQ3 351 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 CPNE7Q9UBL6 633 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 ST6GAL1P15907 406 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 KLF9Q13886 244 aaPredicted RBP22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 C10orf53Q8N6V4 93 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 RPLP0P6Q8NHW5 317 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 WDR89Q96FK6 387 aaPredicted RBP22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 GPR137Q96N19 417 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 METTL17Q9H7H0 456 aaPredicted RBP22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 ENTPD2Q9Y5L3 495 aa22.35■■□□□ 1.17
SPTSSA-201ENST00000298130 POU2F2P09086 479 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 CCR4P51679 360 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 C9orf50Q5SZB4 431 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 OR2T4Q8NH00 348 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 CEP76Q8TAP6 659 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 SGTBQ96EQ0 304 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF426Q9BUY5 554 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 C20orf85Q9H1P6 137 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 NRIP3Q9NQ35 241 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 MPDZO75970 2070 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 ARL6IP5O75915 188 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 SLC22A5O76082 557 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 UCHL1P09936 223 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 OR2T7P0C7T2 308 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 SPI1P17947 270 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 CD53P19397 219 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 S1PR1P21453 382 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 DNASE1P24855 282 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 C19orf57Q0VDD7 668 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 AVL9Q8NBF6 648 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 NPEPL1Q8NDH3 523 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 OR2T35Q8NGX2 323 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 OR2T27Q8NH04 317 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 OR8K3Q8NH51 312 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 ADAMTS14Q8WXS8 1223 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 Q96M85 177 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 HEXA-AS1Q9H8Q6 139 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 EMC7Q9NPA0 242 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 SPATA2Q9UM82 520 aa22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 PCDHGA9Q9Y5G4 932 aaKnown RBP22.34■■□□□ 1.17
SPTSSA-201ENST00000298130 TRAV1-2A0A0B4J238 106 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 ZFPL1O95159 310 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 HRGP04196 525 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 ARPC4P59998 168 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 RPL6Q02878 288 aaKnown RBP22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 CAMK2DQ13557 499 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 RNF44Q7L0R7 432 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 KANSL1Q7Z3B3 1105 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 RIT1Q92963 219 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 OR2M2Q96R28 347 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 SEC22CQ9BRL7 303 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 TMEM106CQ9BVX2 250 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 PBX4Q9BYU1 374 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 LMAN2LQ9H0V9 348 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 C14orf105Q9NVL8 296 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 ABRACLQ9P1F3 81 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 MPC2O95563 127 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 CFDP00746 253 aaPredicted RBP22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 OR8G3PP0DMU2 310 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 Q6ZSR6 202 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 RGP1Q92546 391 aaPredicted RBP22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 RBM18Q96H35 190 aaKnown RBP22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 KLHDC3Q9BQ90 382 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 TRIM2Q9C040 744 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 RANBP3Q9H6Z4 567 aaPredicted RBP22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 SERTAD3Q9UJW9 196 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms