RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SOCS2O14508 198 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 ADAMDEC1O15204 470 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 GPIP06744 558 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 RPS4Y1P22090 263 aaKnown RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 SLC6A2P23975 617 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 FASP25445 335 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 MTPNP58546 118 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 CAPRIN1Q14444 709 aaKnown RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 FGD3Q5JSP0 725 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 PRAMEF8Q5VWM4 474 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 PRAMEF7Q5VXH5 474 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 REEP3Q6NUK4 255 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 MEX3BQ6ZN04 569 aaKnown RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 ZNF836Q6ZNA1 936 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 C10orf111Q8N326 155 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 BBS10Q8TAM1 723 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 FNDC9Q8TBE3 224 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 LRRC46Q96FV0 321 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 CPPED1Q9BRF8 314 aaPredicted RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 TRIM8Q9BZR9 551 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 BCL2L10Q9HD36 194 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 TIGARQ9NQ88 270 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 DNAJB12Q9NXW2 375 aaKnown RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 PACSIN3Q9UKS6 424 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 MCTS1Q9ULC4 181 aaKnown RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 ZNF443Q9Y2A4 671 aaPredicted RBP10.85□□□□□ -0.67
HMGB2-201ENST00000296503 ZNF175Q9Y473 711 aa10.85□□□□□ -0.67
HMGB2-201ENST00000296503 CLDN25C9JDP6 229 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 IL18BPO95998 194 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 GKN3PP0CG01 181 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 ARAFP10398 606 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 SHC1P29353 583 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 APOBEC1P41238 236 aaKnown RBP10.84□□□□□ -0.67
HMGB2-201ENST00000296503 EIF2B2P49770 351 aaKnown RBP10.84□□□□□ -0.67
HMGB2-201ENST00000296503 EEF1A1P68104 462 aaKnown RBP10.84□□□□□ -0.67
HMGB2-201ENST00000296503 SELENBP1Q13228 472 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 SCARB2Q14108 478 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 CYP51A1Q16850 503 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 ZSWIM7Q19AV6 140 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 EEF1A1P5Q5VTE0 462 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 GPR107Q5VW38 600 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 PLEKHM3Q6ZWE6 761 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 KRT73Q86Y46 540 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 ZNF440Q8IYI8 595 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 DHRSXQ8N5I4 330 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 CNEP1R1Q8N9A8 125 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 RELL2Q8NC24 303 aaPredicted RBP10.84□□□□□ -0.67
HMGB2-201ENST00000296503 MARVELD3Q96A59 401 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 REXO5Q96IC2 774 aaKnown RBP10.84□□□□□ -0.67
HMGB2-201ENST00000296503 ADGRG7Q96K78 797 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 DCUN1D5Q9BTE7 237 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 SPATA9Q9BWV2 254 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 SEMA6AQ9H2E6 1030 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 NANOGQ9H9S0 305 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 HMG20AQ9NP66 347 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 MED12LQ86YW9 2145 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 DSPPQ9NZW4 1301 aa10.84□□□□□ -0.67
HMGB2-201ENST00000296503 CDHR4A6H8M9 788 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 AP3D1O14617 1153 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 MRASO14807 208 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 NTN1O95631 604 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 THBS1P07996 1170 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 TFPIP10646 304 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 FUT4P22083 530 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 UQCRC1P31930 480 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ADARB1P78563 741 aaKnown RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 TFF3Q07654 80 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SELPLGQ14242 412 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CTU2Q2VPK5 515 aaKnown RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 RBM48Q5RL73 367 aaKnown RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 GTF2IRD2BQ6EKJ0 949 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 KCTD8Q6ZWB6 473 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 GTF2IRD2Q86UP8 949 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CHAC2Q8WUX2 184 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 RDH12Q96NR8 316 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SPATA5L1Q9BVQ7 753 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SFXN3Q9BWM7 321 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 TMEM38AQ9H6F2 299 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 MOV10Q9HCE1 1003 aaKnown RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CTPS2Q9NRF8 586 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ACTR3BQ9P1U1 418 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 INTS1Q8N201 2190 aaKnown RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 A0A1W2PNR3 127 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ETV2O00321 342 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SYT5O00445 386 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CLOCKO15516 846 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ADAM11O75078 769 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 AQP8O94778 261 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 PLGP00747 810 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CRHP06850 196 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 FCGR2AP12318 317 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 MSX2P35548 267 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 HTR3AP46098 478 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ASCL1P50553 236 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms