RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 FADS6Q8N9I5 356 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 PTP4A1Q93096 173 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 GPX7Q96SL4 187 aaPredicted RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 ANGPTL4Q9BY76 406 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 OR11A1Q9GZK7 315 aa20.69■□□□□ 0.9
PTX3-201ENST00000295927 FGF20Q9NP95 211 aaPredicted RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 RYDENQ9NUL5 291 aaKnown RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 DIMT1Q9UNQ2 313 aaKnown RBP20.69■□□□□ 0.9
PTX3-201ENST00000295927 IFNGP01579 166 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 HIST1H2ABP04908 130 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 CD82P27701 267 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 TMBIM6P55061 237 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 PLPPR5Q32ZL2 321 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 ANKDD1AQ495B1 522 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 SLC22A10Q63ZE4 541 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 NIPAL3Q6P499 406 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 B3GNT6Q6ZMB0 384 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 HIST3H2AQ7L7L0 130 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 ASCL5Q7RTU5 278 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 NANOGNBQ7Z5D8 188 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 LRRC75AQ8NAA5 344 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 SLC37A3Q8NCC5 494 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 HIST1H2ACQ93077 130 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 KATNB1Q9BVA0 655 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 CLEC2DQ9UHP7 191 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 RIF1Q5UIP0 2472 aaKnown RBP20.68■□□□□ 0.9
PTX3-201ENST00000295927 IRGMA1A4Y4 181 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 PROB1E7EW31 1015 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 H3BMQ9 156 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 M0R082 166 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 TSPAN19P0C672 248 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 HIST1H1CP16403 213 aaKnown RBP20.68■□□□□ 0.9
PTX3-201ENST00000295927 ERVK-25P63136 954 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 ALG10Q5BKT4 473 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 SLC25A53Q5H9E4 307 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 ACER2Q5QJU3 275 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 FAM69AQ5T7M9 428 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 RNLSQ5VYX0 342 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 DTX1Q86Y01 620 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 CYB561A3Q8NBI2 242 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 OR4K17Q8NGC6 315 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 OR52E2Q8NGJ4 325 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 PSMF1Q92530 271 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 SLC25A36Q96CQ1 311 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 YIPF6Q96EC8 236 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 COG8Q96MW5 612 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 PROK2Q9HC23 129 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 KLHL1Q9NR64 748 aa20.68■□□□□ 0.9
PTX3-201ENST00000295927 SHISA8B8ZZ34 492 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 ARPC3O15145 178 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 MT-ATP6P00846 226 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 NOVA1P51513 510 aaKnown RBP20.67■□□□□ 0.9
PTX3-201ENST00000295927 TIGD6Q17RP2 521 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 C5orf46Q6UWT4 87 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 MEPCEQ7L2J0 689 aaKnown RBP20.67■□□□□ 0.9
PTX3-201ENST00000295927 SHFQ7M4L6 423 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 OR4K13Q8NH42 304 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 NTNG2Q96CW9 530 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 THOC3Q96J01 351 aaKnown RBP20.67■□□□□ 0.9
PTX3-201ENST00000295927 MRGPRX4Q96LA9 322 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 OR5M11Q96RB7 305 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 CXorf56Q9H5V9 222 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 KLHL21Q9UJP4 597 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 ERGIC3Q9Y282 383 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 DMXL1Q9Y485 3027 aa20.67■□□□□ 0.9
PTX3-201ENST00000295927 NOL3O60936 208 aaKnown RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 RPL18Q07020 188 aaKnown RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 DBPQ10586 325 aaPredicted RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 ZNF367Q7RTV3 350 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 MAMDC2Q7Z304 686 aaPredicted RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 FAM98AQ8NCA5 519 aaKnown RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 SDR9C7Q8NEX9 313 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 POC1BQ8TC44 478 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 RELTQ969Z4 430 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 C1GALT1C1Q96EU7 318 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 SGCZQ96LD1 299 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 GPN2Q9H9Y4 310 aaPredicted RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 ASCL3Q9NQ33 180 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 ANKRD10Q9NXR5 420 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 PTTG2Q9NZH5 202 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 IDH3BO43837 385 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 AHSA1O95433 338 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 CD14P08571 375 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 PCSK6P29122 969 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 CTXN1P60606 82 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.66■□□□□ 0.9
PTX3-201ENST00000295927 MED22Q15528 200 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 TGIF1Q15583 401 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 SLC16A12Q6ZSM3 486 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 MDGA2Q7Z553 956 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 ANKRD13BQ86YJ7 626 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 PLCZ1Q86YW0 608 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 NANOGP1Q8N7R0 232 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 RAB2BQ8WUD1 216 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 TSC22D3Q99576 134 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 PTGES2Q9H7Z7 377 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 SEC14L4Q9UDX3 406 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 ENPP5Q9UJA9 477 aa20.66■□□□□ 0.9
PTX3-201ENST00000295927 EXOGQ9Y2C4 368 aaKnown RBP20.66■□□□□ 0.9
PTX3-201ENST00000295927 SLC6A5Q9Y345 797 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms