RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TMEM181Q9P2C4 612 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 UPB1Q9UBR1 384 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 HDGFL3Q9Y3E1 203 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 WDR45Q9Y484 360 aa8.1□□□□□ -1.11
CNOT9-202ENST00000295701 TMED7-TICAM2A0A0A6YYA0 188 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 AKR7A3O95154 331 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 AK1P00568 194 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SRD5A1P18405 259 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 NR4A2P43354 598 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 MAGEA8P43361 318 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 PDLIM4P50479 330 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 TUBA1BP68363 451 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 TUBA4AP68366 448 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 KCNJ10P78508 379 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 EMX2Q04743 252 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 CHRNB3Q05901 458 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SLC17A1Q14916 467 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SYPL1Q16563 259 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 GPAT3Q53EU6 434 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SAXO2Q658L1 398 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 FDX2Q6P4F2 183 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 BHLHB9Q6PI77 547 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 TUBA1AQ71U36 451 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 ARFGAP2Q8N6H7 521 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 TMEM99Q8N816 258 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 MIPOL1Q8TD10 442 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 ZNF385AQ96PM9 386 aaKnown RBP8.09□□□□□ -1.11
CNOT9-202ENST00000295701 VRK1Q99986 396 aaPredicted RBP8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SEC61A2Q9H9S3 476 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 FKRPQ9H9S5 495 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 MKS1Q9NXB0 559 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 DCTN4Q9UJW0 460 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 OSGIN1Q9UJX0 560 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SLC35A3Q9Y2D2 325 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 TMED7Q9Y3B3 224 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 SPIN1Q9Y657 262 aaPredicted RBP8.09□□□□□ -1.11
CNOT9-202ENST00000295701 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
CNOT9-202ENST00000295701 IGHV1-18A0A0C4DH31 117 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 LRP5LA4QPB2 252 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 MEGF11A6BM72 1044 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 NR5A2O00482 541 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 RNASET2O00584 256 aaKnown RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 ANKRD28O15084 1053 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 TGFAP01135 160 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 CHRM4P08173 479 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 APEHP13798 732 aaKnown RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 UQCRC2P22695 453 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 TACR3P29371 465 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 MPGP29372 298 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 GZMKP49863 264 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 NME5P56597 212 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 PRPS1P60891 318 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 SLC35A1P78382 337 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 BNIP2Q12982 314 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 CEACAM7Q14002 265 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 PDCD2Q16342 344 aaPredicted RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 ATAD3BQ5T9A4 648 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 AP1ARQ63HQ0 302 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 FAM166AQ6J272 317 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 VHLLQ6RSH7 139 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 LINGO2Q7L985 606 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 CNPY4Q8N129 248 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 ZCCHC24Q8N2G6 241 aaKnown RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 ANKFN1Q8N957 763 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 AURKBQ96GD4 344 aaPredicted RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 PKNOX2Q96KN3 472 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 NAA11Q9BSU3 229 aaPredicted RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.08□□□□□ -1.12
CNOT9-202ENST00000295701 KCNS2Q9ULS6 477 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 AMDHD2Q9Y303 409 aa8.08□□□□□ -1.12
CNOT9-202ENST00000295701 WDR91A4D1P6 747 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 HMGN4O00479 90 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 DNPH1O43598 174 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 LGI1O95970 557 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 BPGMP07738 259 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 CSF3P09919 207 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 GKN3PP0CG01 181 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 CALCRP30988 508 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 IL2RGP31785 369 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 CHI3L1P36222 383 aaPredicted RBP8.07□□□□□ -1.12
CNOT9-202ENST00000295701 CLK1P49759 484 aaKnown RBP8.07□□□□□ -1.12
CNOT9-202ENST00000295701 SELENOPP49908 381 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 POLR2HP52434 150 aaKnown RBP8.07□□□□□ -1.12
CNOT9-202ENST00000295701 CASP8Q14790 479 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 OR7A5Q15622 319 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 CR1LQ2VPA4 569 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 IQCCQ4KMZ1 466 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 SPANXN4Q5MJ08 99 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 OTUD3Q5T2D3 398 aaPredicted RBP8.07□□□□□ -1.12
CNOT9-202ENST00000295701 AAED1Q7RTV5 226 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 SPATA19Q7Z5L4 167 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 MYPOPQ86VE0 399 aaPredicted RBP8.07□□□□□ -1.12
CNOT9-202ENST00000295701 RNF130Q86XS8 419 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 ZNF781Q8N8C0 355 aa8.07□□□□□ -1.12
CNOT9-202ENST00000295701 C1orf162Q8NEQ5 155 aaPredicted RBP8.07□□□□□ -1.12
CNOT9-202ENST00000295701 OR9K2Q8NGE7 335 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms