RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 TNFP01375 233 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 GDNFP39905 211 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
NCSTN-201ENST00000294785 RPL6Q02878 288 aaKnown RBP12.54□□□□□ -0.4
NCSTN-201ENST00000294785 ZC3H14Q6PJT7 736 aaKnown RBP12.54□□□□□ -0.4
NCSTN-201ENST00000294785 TEX261Q6UWH6 196 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 LYPD8Q6UX82 237 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 LSRQ86X29 649 aaPredicted RBP12.54□□□□□ -0.4
NCSTN-201ENST00000294785 SLC35F3Q8IY50 421 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 OR8H1Q8NGG4 311 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 ADAMTS18Q8TE60 1221 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 MED30Q96HR3 178 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 RADILQ96JH8 1075 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 MRGPRX1Q96LB2 322 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 TTTY10Q9BZA0 68 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 CERS4Q9HA82 394 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 ZNF281Q9Y2X9 895 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 U3KQ87 197 aa12.54□□□□□ -0.4
NCSTN-201ENST00000294785 OR7A10O76100 309 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 GLCEO94923 617 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
NCSTN-201ENST00000294785 FAM53BQ14153 422 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 KCTD20Q7Z5Y7 419 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 OIT3Q8WWZ8 545 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 HSPA12BQ96MM6 686 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 ADAM18Q9Y3Q7 739 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 NPTNQ9Y639 398 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 A0A0B4J203 849 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 OR5K3A6NET4 321 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 IFITM5A6NNB3 132 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 GABARAPH6UMI1 98 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 GPR171O14626 319 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 EGFP01133 1207 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 RNH1P13489 461 aaKnown RBP12.53□□□□□ -0.4
NCSTN-201ENST00000294785 CCR6P51684 374 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 STX4Q12846 297 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 ZNF595Q8IYB9 648 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 CMTM4Q8IZR5 234 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 RCBTB1Q8NDN9 531 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 OR51L1Q8NGJ5 315 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 OR9A4Q8NGU2 314 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 PATE1Q8WXA2 126 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 NMNAT3Q96T66 252 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 PDCD1LG2Q9BQ51 273 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 C20orf85Q9H1P6 137 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 SEMA6CQ9H3T2 930 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 SCP2D1Q9UJQ7 156 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 COPS3Q9UNS2 423 aa12.53□□□□□ -0.4
NCSTN-201ENST00000294785 SERINC4A6NH21 518 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 ZNF593O00488 134 aaPredicted RBP12.52□□□□□ -0.4
NCSTN-201ENST00000294785 CTNSO60931 367 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 PEX14O75381 377 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 TGM6O95932 706 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 CSTAP01040 98 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 RAF1P04049 648 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 CXCL3P19876 107 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 RABIFP47224 123 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 ARPC4P59998 168 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 ELFN2Q5R3F8 820 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.4
NCSTN-201ENST00000294785 FAM199XQ6PEV8 388 aaPredicted RBP12.52□□□□□ -0.4
NCSTN-201ENST00000294785 NPSR1Q6W5P4 371 aa12.52□□□□□ -0.4
NCSTN-201ENST00000294785 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.4
NCSTN-201ENST00000294785 NUP210LQ5VU65 1888 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 LINC00862A6NCI5 91 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 OR6C68A6NDL8 312 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
NCSTN-201ENST00000294785 FOXS1O43638 330 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 SELENOFO60613 162 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 TPPPO94811 219 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 MT-ND4P03905 459 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 WNT1P04628 370 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 TACSTD2P09758 323 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 RAB40ALP0C0E4 278 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.41
NCSTN-201ENST00000294785 CTHP32929 405 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 CCR9P51686 369 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 EPHA4P54764 986 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 ST3GAL2Q16842 350 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.41
NCSTN-201ENST00000294785 Q6ZSR6 202 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 SLC37A2Q8TED4 501 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 RAB40AQ8WXH6 277 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 STARD5Q9NSY2 213 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 KLHL9Q9P2J3 617 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 MOKQ9UQ07 419 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 SLC6A5Q9Y345 797 aa12.52□□□□□ -0.41
NCSTN-201ENST00000294785 KHNYNO15037 678 aaKnown RBP12.51□□□□□ -0.41
NCSTN-201ENST00000294785 SLC22A5O76082 557 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms