RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 OR1E3Q8WZA6 343 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 RTP3Q9BQQ7 232 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 SLC16A7O60669 478 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 FGF18O76093 207 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 JUNDP17535 347 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 SERPINA2P20848 420 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 PRDX3P30048 256 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 VIPR2P41587 438 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 HTR3AP46098 478 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 GIPRP48546 466 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 FPGSQ05932 587 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 ACSM1Q08AH1 577 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 KIAA0895LQ68EN5 471 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 PODNL1Q6PEZ8 512 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 GAREM2Q75VX8 874 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 LAX1Q8IWV1 398 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 TCTE3Q8IZS6 198 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 CELF2-AS1Q8N7Q2 184 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 GAREM1Q9H706 876 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 TAS2R16Q9NYV7 291 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 CPNE7Q9UBL6 633 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 TMEM269A0A1B0GVZ9 245 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 HIDE1A8MVS5 230 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 HBE1P02100 147 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 CHRM4P08173 479 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 ZDHHC11BP0C7U3 371 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 ACP2P11117 423 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 GDNFP39905 211 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 FCN2Q15485 313 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 RBMS3Q6XE24 437 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 TMEM151BQ8IW70 566 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 MKXQ8IYA7 352 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 CD200R1Q8TD46 325 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 UPRTQ96BW1 309 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 RSPRY1Q96DX4 576 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 OR5B2Q96R09 309 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 STRADBQ9C0K7 418 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 OR10A5Q9H207 317 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 OR10A2Q9H208 303 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 APOBEC3BQ9UH17 382 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 VDAC3Q9Y277 283 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 LTBP1Q14766 1721 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 TRAV27A0A087WT01 109 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 STC2O76061 302 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 TK1P04183 234 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 CD79AP11912 226 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 OR7E24Q6IFN5 339 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 TSACCQ96A04 125 aaPredicted RBP10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 RAB39BQ96DA2 213 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 UHRF2Q96PU4 802 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 ALOXE3Q9BYJ1 711 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 MED16Q9Y2X0 877 aa10.02□□□□□ -0.8
PKNOX1-201ENST00000291547 CNR1P21554 472 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 APEX1P27695 318 aaKnown RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 NPBWR1P48145 328 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ERVFC1P60507 584 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 FBXO46Q6PJ61 603 aaPredicted RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 PELI2Q9HAT8 420 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 DCAF16Q9NXF7 216 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 SLC22A7Q9Y694 548 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ARHGAP33O14559 1287 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 UGDHO60701 494 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 SLC6A8P48029 635 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 BDH1Q02338 343 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 Q6ZPB1 254 aaPredicted RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 CBLL1Q75N03 491 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 LRRC56Q8IYG6 542 aaPredicted RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ADGRF3Q8IZF5 1079 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 PXT1Q8NFP0 134 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 LRRC46Q96FV0 321 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ZFYVE21Q9BQ24 234 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 RNF32Q9H0A6 362 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 FKRPQ9H9S5 495 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 PCDHGA5Q9Y5G8 931 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 MROH6A6NGR9 719 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ANKRD30BLA7E2S9 258 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ADAM12O43184 909 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 GPRIN2O60269 458 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 CLDN12P56749 244 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 GPR18Q14330 331 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 CNN3Q15417 329 aaKnown RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 RTL6Q6ICC9 239 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ADAM5Q6NVV9 412 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ZBTB44Q8NCP5 570 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 OR52H1Q8NGJ2 320 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 OR10R2Q8NGX6 335 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 HPSE2Q8WWQ2 592 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 RTP4Q96DX8 246 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 CMSS1Q9BQ75 279 aaKnown RBP10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 C1GALT1Q9NS00 363 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 RARRES3Q9UL19 164 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 RPH3ALQ9UNE2 315 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms