RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 M6PRP20645 277 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 RPL35P42766 123 aaKnown RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 CCR9P51686 369 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 LCN6P62502 163 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 SORDQ00796 357 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 MAPK14Q16539 360 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 NHLRC1Q6VVB1 395 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF619Q8N2I2 560 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 RLN3Q8WXF3 142 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ST8SIA2Q92186 375 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 SCMH1Q96GD3 660 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 SDF2Q99470 211 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 KCMF1Q9P0J7 381 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ELF5Q9UKW6 265 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 H3BUI4 141 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 PRKNO60260 465 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 ACTA2P62736 377 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 RPS21P63220 83 aaKnown RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 ACTG2P63267 376 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 DEFB110Q30KQ9 67 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SSX6Q7RTT6 188 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 IQCF2Q8IXL9 164 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 B3GNT4Q9C0J1 378 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 LYARQ9NX58 379 aaKnown RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 NOP16Q9Y3C1 178 aaKnown RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 NPFFR2Q9Y5X5 522 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 TFPIP10646 304 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 UBL4AP11441 157 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SRMP19623 302 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 PRRT3Q5FWE3 981 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 PARM1Q6UWI2 310 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 RFLNBQ8N5W9 214 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 METTL27Q8N6F8 245 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 PTP4A1Q93096 173 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 CDCA3Q99618 268 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SLC38A3Q99624 504 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 KCNJ15Q99712 375 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 COMMD4Q9H0A8 199 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 CMC2Q9NRP2 79 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 MLXQ9UH92 298 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 TCRBV16S1A1N1A0A5B0 115 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SIGLEC5O15389 551 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 HIST1H1CP16403 213 aaKnown RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SIGLEC14Q08ET2 396 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 CD200R1LQ6Q8B3 271 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 TMEM64Q6YI46 380 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 SAMD14Q8IZD0 417 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 TSACCQ96A04 125 aaPredicted RBP12.36□□□□□ -0.43
SCAF4-201ENST00000286835 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 TSSK2Q96PF2 358 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 ULBP3Q9BZM4 244 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 NRIP3Q9NQ35 241 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 CA5BQ9Y2D0 317 aa12.36□□□□□ -0.43
SCAF4-201ENST00000286835 TMEM72A0PK05 275 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 DOK2O60496 412 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 CPMP14384 443 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 CAMK2DQ13557 499 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ENPP2Q13822 863 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 IRF4Q15306 451 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 RPL13AP3Q6NVV1 102 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 OR6M1Q8NGM8 313 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 DUSP19Q8WTR2 217 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 RAB7BQ96AH8 199 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 SLC25A36Q96CQ1 311 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 RASD2Q96D21 266 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 CXorf58Q96LI9 332 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ASB16Q96NS5 453 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 SLC17A9Q9BYT1 436 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ERVMER34-1Q9H9K5 563 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ZMAT3Q9HA38 289 aaKnown RBP12.35□□□□□ -0.43
SCAF4-201ENST00000286835 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 HEATR5BQ9P2D3 2071 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 C11orf98E9PRG8 122 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 NDUFB2O95178 105 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 MPC2O95563 127 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 TBX6O95947 436 aaPredicted RBP12.35□□□□□ -0.43
SCAF4-201ENST00000286835 VAMP1P23763 118 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 SKP1P63208 163 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 UBE2NLQ5JXB2 153 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 SLC25A30Q5SVS4 291 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 KRT77Q7Z794 578 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 OR5T3Q8NGG3 340 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ATG5Q9H1Y0 275 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 PRDM7Q9NQW5 492 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 PTTG3PQ9NZH4 202 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 RABL2BQ9UNT1 228 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 E9PQ18 207 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 CSTAP01040 98 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ADRB1P08588 477 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms