RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 GRK1Q15835 563 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 DEFB134Q4QY38 66 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 EIPR1Q53HC9 387 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 ZNF311Q5JNZ3 666 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 CASP12Q6UXS9 341 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 THNSL2Q86YJ6 484 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 MCATQ8IVS2 390 aaKnown RBP6.99□□□□□ -1.29
TRIM42-201ENST00000286349 UBQLNLQ8IYU4 475 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 STX19Q8N4C7 294 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 SYT14Q8NB59 555 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 OR4M1Q8NGD0 313 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 DEDD2Q8WXF8 326 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 SLC38A4Q969I6 547 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 YIPF6Q96EC8 236 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 BSCL2Q96G97 398 aaPredicted RBP6.99□□□□□ -1.29
TRIM42-201ENST00000286349 DMRTA2Q96SC8 542 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 ZNF559Q9BR84 538 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 FUZQ9BT04 418 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 PRRG3Q9BZD7 231 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 HDHD2Q9H0R4 259 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 MIR1-1HGQ9H1L0 117 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 SEMA6CQ9H3T2 930 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 MTHFD2LQ9H903 347 aaPredicted RBP6.99□□□□□ -1.29
TRIM42-201ENST00000286349 ANKHQ9HCJ1 492 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 KRCC1Q9NPI7 259 aaPredicted RBP6.99□□□□□ -1.29
TRIM42-201ENST00000286349 RHCGQ9UBD6 479 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 GPR55Q9Y2T6 319 aaPredicted RBP6.99□□□□□ -1.29
TRIM42-201ENST00000286349 PCDHGB6Q9Y5F9 930 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 PCDHGB2Q9Y5G2 931 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 PCDHGA5Q9Y5G8 931 aa6.99□□□□□ -1.29
TRIM42-201ENST00000286349 MPTX1A8MV57 137 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 KRBOX1C9JBD0 128 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 H0YGG7 62 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 TO15178 435 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 DOK2O60496 412 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CPNE3O75131 537 aaKnown RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 NME6O75414 186 aaPredicted RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 UBXN7O94888 489 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SPDEFO95238 335 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CPMP14384 443 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CSNK1EP49674 416 aaKnown RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ARF3P61204 181 aaPredicted RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 HHEXQ03014 270 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 FUT5Q11128 374 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ST3GAL3Q11203 375 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 LARS2Q15031 903 aaKnown RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ELOCQ15369 112 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SMN1Q16637 294 aaKnown RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SYT16Q17RD7 645 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ARHGAP11BQ3KRB8 267 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 MEDAGQ5VYS4 303 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 MFSD12Q6NUT3 480 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 PGBD2Q6P3X8 592 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ZNF782Q6ZMW2 699 aaPredicted RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SMIM15Q7Z3B0 74 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 IQCHQ86VS3 1027 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SNX29P2Q8IUI4 249 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CCDC103Q8IW40 242 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 LRRC17Q8N6Y2 441 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SUMF1Q8NBK3 374 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ZCCHC10Q8TBK6 192 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SLC37A2Q8TED4 501 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SNX33Q8WV41 574 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 GGHQ92820 318 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 RBPMSQ93062 196 aaKnown RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 R3HDM4Q96D70 268 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 OTUB1Q96FW1 271 aaPredicted RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ARHGDIGQ99819 225 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CCDC3Q9BQI4 270 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 NIPAL2Q9H841 368 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SEBOXQ9HB31 216 aaPredicted RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 FSCN3Q9NQT6 498 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ZFP57Q9NU63 452 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ZNF226Q9NYT6 803 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 PISDQ9UG56 409 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 LRP4O75096 1905 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 OR2AT4A6NND4 320 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 M0R3G1 203 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 TLR4O00206 839 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 P2RX6O15547 441 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 STX11O75558 287 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 NXPH2O95156 264 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 RRASP10301 218 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SLC2A1P11166 492 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 PPP5CP53041 499 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 NUTF2P61970 127 aaKnown RBP6.98□□□□□ -1.29
TRIM42-201ENST00000286349 DUSP2Q05923 314 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 GAGE1Q13065 139 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 RUNX2Q13950 521 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 TCEA2Q15560 299 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CTF1Q16619 201 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 DGUOKQ16854 277 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 CHRFAM7AQ494W8 412 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 TMEM201Q5SNT2 666 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 SLC25A30Q5SVS4 291 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 ARHGAP40Q5TG30 622 aa6.98□□□□□ -1.29
TRIM42-201ENST00000286349 PEAR1Q5VY43 1037 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms