RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MIB2Q96AX9 1013 aa19.57■□□□□ 0.72
PDLIM3-203ENST00000284771 WDYHV1Q96HA8 205 aa19.57■□□□□ 0.72
PDLIM3-203ENST00000284771 MGAT4BQ9UQ53 548 aa19.57■□□□□ 0.72
PDLIM3-203ENST00000284771 MITFO75030 526 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 TP53P04637 393 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 KLK2P20151 261 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 FPR3P25089 353 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 IDUAP35475 653 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 MLLT10P55197 1068 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 NFATC3Q12968 1075 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 OR7A5Q15622 319 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 BCL2A1Q16548 175 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 KLHL17Q6TDP4 642 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 TRAPPC4Q9Y296 219 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 ZGRF1Q86YA3 2104 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 NPIPA2E9PIF3 369 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 NPIPA3F8WFD2 350 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 OR2T1O43869 369 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 FZD7O75084 574 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 OR7A10O76100 309 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 ADAP00813 363 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 CPN1P15169 458 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 IFNGR2P38484 337 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 FXYD6P3P58550 94 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 TSPAN31Q12999 210 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 DAG1Q14118 895 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 GXYLT1Q4G148 440 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 KRTCAP3Q53RY4 240 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 ARHGAP11AQ6P4F7 1023 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 CDK20Q8IZL9 346 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 GALNT4Q8N4A0 578 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 C10orf53Q8N6V4 93 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 OR6S1Q8NH40 331 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 OR10D3Q8NH80 312 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 GNPDA2Q8TDQ7 276 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 SDCCAG3Q96C92 435 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 ZNF845Q96IR2 970 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 BBC3Q96PG8 261 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 SRXN1Q9BYN0 137 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 NANSQ9NR45 359 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 REV1Q9UBZ9 1251 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 TMEM5Q9Y2B1 443 aa19.56■□□□□ 0.72
PDLIM3-203ENST00000284771 COL6A6A6NMZ7 2263 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 KMT2BQ9UMN6 2715 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 GJE1A6NN92 205 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 EFCAB9A8MZ26 197 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 ZNF814B7Z6K7 855 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 SULT2B1O00204 365 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 DLGAP1O14490 977 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 ATXN7O15265 892 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 PTP4A3O75365 173 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 PMS2P2O95744 297 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 IGFBP1P08833 259 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 SAGP10523 405 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 GRPRP30550 384 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 GCKP35557 465 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 ALDH3A2P51648 485 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 CD300LDQ6UXZ3 194 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 OR13C2Q8NGS9 318 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 OSTF1Q92882 214 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 TNFRSF13CQ96RJ3 184 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 RBM4BQ9BQ04 359 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 RBM4Q9BWF3 364 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 ENKD1Q9H0I2 346 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 FKRPQ9H9S5 495 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 USE1Q9NZ43 259 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 SIGLEC7Q9Y286 467 aa19.55■□□□□ 0.72
PDLIM3-203ENST00000284771 SHANK1Q9Y566 2161 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 TRAV27A0A087WT01 109 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 HTR3EA5X5Y0 456 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 MT-ATP6P00846 226 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 EIF1AXP47813 144 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 H3F3AP84243 136 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 HBMQ6B0K9 141 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 PLXDC2Q6UX71 529 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 GALNT5Q7Z7M9 940 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 KIF18BQ86Y91 864 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 GHDCQ8N2G8 530 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 OR51A7Q8NH64 312 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 OR2V1Q8NHB1 315 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 PRDM14Q9GZV8 571 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 ZNF229Q9UJW7 825 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 KIAA1549Q9HCM3 1950 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 ALPK2Q86TB3 2170 aa19.54■□□□□ 0.72
PDLIM3-203ENST00000284771 M0R082 166 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 CXCL13O43927 109 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 AKR7A3O95154 331 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 TSPAN19P0C672 248 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 P2RY4P51582 365 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 CARD18P57730 90 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 RAC3P60763 192 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 OAFQ86UD1 273 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 TMEM99Q8N816 258 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 ZNF417Q8TAU3 575 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 ZNF587Q96SQ5 575 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 UCK2Q9BZX2 261 aa19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 KRCC1Q9NPI7 259 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-203ENST00000284771 RAMP1O60894 148 aa19.52■□□□□ 0.72
PDLIM3-203ENST00000284771 ENPP1P22413 925 aa19.52■□□□□ 0.72
PDLIM3-203ENST00000284771 EPHA2P29317 976 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms