RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 HSD17B8Q92506 261 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 NEUROG1Q92886 237 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 PIGTQ969N2 578 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 PERPQ96FX8 193 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 NAA11Q9BSU3 229 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-201ENST00000275036 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 PDLIM1O00151 329 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 TPST2O60704 377 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 MRPL33O75394 65 aaKnown RBP12.71□□□□□ -0.37
HMGN3-201ENST00000275036 ITGA5P08648 1049 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 FOSL1P15407 271 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 GUCY1A3Q02108 690 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 NFYCQ13952 458 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 STK11Q15831 433 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 SHEQ5VZ18 495 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 CASP12Q6UXS9 341 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 KRT73Q86Y46 540 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 UBE2J2Q8N2K1 259 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 LSMEM1Q8N8F7 131 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 HIPK4Q8NE63 616 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 C18orf12Q96KH6 178 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 ZNF385AQ96PM9 386 aaKnown RBP12.71□□□□□ -0.37
HMGN3-201ENST00000275036 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 MALT1Q9UDY8 824 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 SLC9A8Q9Y2E8 581 aa12.71□□□□□ -0.37
HMGN3-201ENST00000275036 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-201ENST00000275036 IGKV1D-42A0A075B6H8 117 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 A0A1B0GWA3 101 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 DPRXA6NFQ7 191 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 HS3ST1O14792 307 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 RAD51DO75771 328 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 MFN2O95140 757 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 GGT1P19440 569 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 GZMMP51124 257 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 ARFIP2P53365 341 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 FAPQ12884 760 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 PPA1Q15181 289 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 CYP51A1Q16850 503 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 TSPO2Q5TGU0 170 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 Q71RC1 249 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-201ENST00000275036 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-201ENST00000275036 ARMC8Q8IUR7 673 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 SMYD1Q8NB12 490 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
HMGN3-201ENST00000275036 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 KTI12Q96EK9 354 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF607Q96SK3 696 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 SPATA5L1Q9BVQ7 753 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 TAPBPLQ9BX59 468 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 KAT8Q9H7Z6 458 aaKnown RBP12.7□□□□□ -0.38
HMGN3-201ENST00000275036 SAR1AQ9NR31 198 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 SLC7A10Q9NS82 523 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 ASB6Q9NWX5 421 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 ANGPT4Q9Y264 503 aa12.7□□□□□ -0.38
HMGN3-201ENST00000275036 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 TRIM64A6NGJ6 449 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 TRIM64BA6NI03 449 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 OR5H1A6NKK0 313 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 ELOA3DA6NLF2 546 aaPredicted RBP12.69□□□□□ -0.38
HMGN3-201ENST00000275036 FXYD1O00168 92 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 FZD7O75084 574 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 OPN1SWP03999 348 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 TROVE2P10155 538 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGN3-201ENST00000275036 RPS5P46782 204 aaKnown RBP12.69□□□□□ -0.38
HMGN3-201ENST00000275036 PTH2RP49190 550 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 RBBP4Q09028 425 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 KLF10Q13118 480 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 GABRA6Q16445 453 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 DUSP7Q16829 419 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 ELOA3BQ3SY89 546 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 NANOGP8Q6NSW7 305 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 YTHDF3Q7Z739 585 aaKnown RBP12.69□□□□□ -0.38
HMGN3-201ENST00000275036 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 P3H2Q8IVL5 708 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF611Q8N823 705 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 C11orf65Q8NCR3 313 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 ELOA3Q8NG57 546 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 GPR32P1Q8NGA4 272 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 OR10A6Q8NH74 314 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 TAAR8Q969N4 342 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 Q96MF0 132 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
HMGN3-201ENST00000275036 SF3B5Q9BWJ5 86 aaKnown RBP12.69□□□□□ -0.38
HMGN3-201ENST00000275036 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 NANOGQ9H9S0 305 aa12.69□□□□□ -0.38
HMGN3-201ENST00000275036 C12orf10Q9HB07 376 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms