RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 GALNT8Q9NY28 637 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 ING1Q9UK53 422 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 HDGFL3Q9Y3E1 203 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 RTTNQ86VV8 2226 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 LIPT2A6NK58 231 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 M0R082 166 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 PIP5K1CO60331 668 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 IFNA14P01570 189 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 FUT1P19526 365 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 GTF2E2P29084 291 aaKnown RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 OPRM1P35372 400 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 MNAT1P51948 309 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 FAM27E3Q08E93 113 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 OR2A2Q6IF42 318 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 GDF7Q7Z4P5 450 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF417Q8TAU3 575 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 DNAJA4Q8WW22 397 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC38A4Q969I6 547 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC41A3Q96GZ6 507 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 TAPBPLQ9BX59 468 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 PAQR5Q9NXK6 330 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF629Q9UEG4 869 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 CD300AQ9UGN4 299 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 A0A087WUJ7 227 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 TRAPPC13A5PLN9 417 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF208O43345 1280 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 CHP2O43745 196 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 NPIPB7O75200 414 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GMNNO75496 209 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 PMS2P2O95744 297 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 IFNW1P05000 195 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 PNMTP11086 282 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 HSD17B1P14061 328 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 NQO1P15559 274 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 CCKARP32238 428 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 NTF4P34130 210 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ASCL1P50553 236 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 UGT2B15P54855 530 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 VLDLRP98155 873 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 LGALS3BPQ08380 585 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZSWIM7Q19AV6 140 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC25A35Q3KQZ1 300 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 IFI44LQ53G44 452 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 C9orf135Q5VTT2 229 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ABLIM2Q6H8Q1 611 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF474Q6S9Z5 364 aaPredicted RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 MEX3BQ6ZN04 569 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 CBLL1Q75N03 491 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 LRRC17Q8N6Y2 441 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF610Q8N9Z0 462 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GEMIN6Q8WXD5 167 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC7A6OSQ96CW6 309 aaPredicted RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZHX1-C8orf76Q96EF9 292 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC47A1Q96FL8 570 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZC3HAV1LQ96H79 300 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GMPPAQ96IJ6 420 aaPredicted RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 NSMCE2Q96MF7 247 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SEPHS2Q99611 448 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 RBM24Q9BX46 236 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 NDE1Q9NXR1 346 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 KLHL9Q9P2J3 617 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 PRSS50Q9UI38 385 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 PROCRQ9UNN8 238 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 AP3M1Q9Y2T2 418 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF716A6NP11 495 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 FTCDNL1E5RQL4 147 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 FFAR1O14842 300 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GYG2O15488 501 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SS18L1O75177 396 aaPredicted RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 LYPD3O95274 346 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GPIP06744 558 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 C8BP07358 591 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 UMPSP11172 480 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 AGAP20933 346 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GRPRP30550 384 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC35A1P78382 337 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 MS4A2Q01362 244 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 LTBQ06643 244 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 GUSBP1Q15486 140 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 TMEM201Q5SNT2 666 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 EEF1A1P5Q5VTE0 462 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SP5Q6BEB4 398 aaPredicted RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF613Q6PF04 617 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 CASP12Q6UXS9 341 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 TSEN54Q7Z6J9 526 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 OR52J3Q8NH60 311 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 LINC01560Q8TB33 94 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC35B4Q969S0 331 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZFP3Q96NJ6 502 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF385AQ96PM9 386 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 PRSS27Q9BQR3 290 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 KLHL4Q9C0H6 718 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 C20orf141Q9NUB4 165 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 MAGEL2Q9UJ55 1249 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 RIMS3Q9UJD0 308 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 A4GNTQ9UNA3 340 aa6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 HEATR1Q9H583 2144 aaKnown RBP6.44□□□□□ -1.38
DEPDC1B-201ENST00000265036 ENO4A6NNW6 628 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms