RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 LIMS3P0CW19 117 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 LIMS4P0CW20 117 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 PRKXP51817 358 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 FOXL2P58012 376 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 PITPNAQ00169 270 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 E2F1Q01094 437 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 TCTE1Q5JU00 501 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 ZNF425Q6IV72 752 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 KIRREL2Q6UWL6 708 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 LYPD4Q6UWN0 246 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 GRPEL2Q8TAA5 225 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 DUSP19Q8WTR2 217 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 DNAJA4Q8WW22 397 aaPredicted RBP11.57□□□□□ -0.56
HERC6-201ENST00000264346 NKX3-1Q99801 234 aaPredicted RBP11.57□□□□□ -0.56
HERC6-201ENST00000264346 SYT4Q9H2B2 425 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 TTC28Q96AY4 2481 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 SBK2P0C263 348 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 FCARP24071 287 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 CD1CP29017 333 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 SFTPDP35247 375 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 TSFMP43897 325 aaKnown RBP11.57□□□□□ -0.56
HERC6-201ENST00000264346 PITPNBP48739 271 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 C4orf46Q504U0 113 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 ZNF782Q6ZMW2 699 aaPredicted RBP11.57□□□□□ -0.56
HERC6-201ENST00000264346 PLXDC1Q8IUK5 500 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 GCDHQ92947 438 aaPredicted RBP11.57□□□□□ -0.56
HERC6-201ENST00000264346 UBQLN4Q9NRR5 601 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 RPH3AQ9Y2J0 694 aaPredicted RBP11.57□□□□□ -0.56
HERC6-201ENST00000264346 ANAPC1Q9H1A4 1944 aa11.57□□□□□ -0.56
HERC6-201ENST00000264346 TNFRSF10CO14798 259 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 SLC16A7O60669 478 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ZNF217O75362 1048 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 CTSBP07858 339 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 PIPP12273 146 aaPredicted RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 SSTR2P30874 369 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 SLC6A9P48067 706 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 OC90Q02509 493 aaPredicted RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 Q5BKY6 102 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ZNF431Q8TF32 576 aaPredicted RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 AKAP7Q9P0M2 348 aaPredicted RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 CTNSO60931 367 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 CRYBB2P43320 205 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ZNF81P51508 661 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 DUSP8Q13202 625 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 FCRL6Q6DN72 434 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 OR7E24Q6IFN5 339 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ZCCHC12Q6PEW1 402 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 TOR1AIP2Q8NFQ8 470 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 OR4M1Q8NGD0 313 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 A0A1W2PPL8 197 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 TMEM129A0AVI4 362 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 FAM221BA6H8Z2 402 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 SRPX2O60687 465 aaPredicted RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 TBX6O95947 436 aaPredicted RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 DCNP07585 359 aaKnown RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 STOMP27105 288 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 LSSP48449 732 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ACTA2P62736 377 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ACTG2P63267 376 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 SERTAD2Q14140 314 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 GAB4Q2WGN9 574 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ZNF613Q6PF04 617 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 MARCH3Q86UD3 253 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 RDH10Q8IZV5 341 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 OR2T4Q8NH00 348 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 MED30Q96HR3 178 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ALG12Q9BV10 488 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 HCAR1Q9BXC0 346 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 PLEKHA1Q9HB21 404 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 GALNT9Q9HCQ5 603 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 DIABLOQ9NR28 239 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ACOXLQ9NUZ1 547 aa11.56□□□□□ -0.56
HERC6-201ENST00000264346 ZNF346Q9UL40 294 aaKnown RBP11.56□□□□□ -0.56
HERC6-201ENST00000264346 KDM4EB2RXH2 506 aaPredicted RBP11.55□□□□□ -0.56
HERC6-201ENST00000264346 C5orf67F2Z3F1 127 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ZNF264O43296 627 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ADAM8P78325 824 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 SNTA1Q13424 505 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ZIC1Q15915 447 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 TMEM225Q6GV28 225 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 NIPAL3Q6P499 406 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 SFXN4Q6P4A7 337 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ZNF101Q8IZC7 436 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 SHISA5Q8N114 240 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 OR4K17Q8NGC6 315 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 OR5AK2Q8NH90 309 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ATOH1Q92858 354 aaPredicted RBP11.55□□□□□ -0.56
HERC6-201ENST00000264346 CMKLR1Q99788 373 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ENKD1Q9H0I2 346 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ZNF304Q9HCX3 659 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 FGF21Q9NSA1 209 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 OR7A10O76100 309 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 LALBAP00709 142 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 CPEP16870 476 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ELK1P19419 428 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 EVI2BP34910 448 aa11.55□□□□□ -0.56
HERC6-201ENST00000264346 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
HERC6-201ENST00000264346 FAM205BPQ63HN1 556 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms