RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 STK35Q8TDR2 534 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 TMEM45BQ96B21 275 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 PERPQ96FX8 193 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 SPATA5L1Q9BVQ7 753 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 HEATR1Q9H583 2144 aaKnown RBP14.16□□□□□ -0.14
USE1-201ENST00000263897 ZNF385DQ9H6B1 395 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 NPHS2Q9NP85 383 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 SLC7A10Q9NS82 523 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 ZNF701Q9NV72 531 aaPredicted RBP14.16□□□□□ -0.14
USE1-201ENST00000263897 ADPRHL2Q9NX46 363 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 TAS2R16Q9NYV7 291 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.16□□□□□ -0.14
USE1-201ENST00000263897 LEF1Q9UJU2 399 aaPredicted RBP14.16□□□□□ -0.14
USE1-201ENST00000263897 TRIM33Q9UPN9 1127 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 NDUFAF1Q9Y375 327 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 ZNF469Q96JG9 3925 aaPredicted RBP14.16□□□□□ -0.14
USE1-201ENST00000263897 NAV3Q8IVL0 2385 aa14.16□□□□□ -0.14
USE1-201ENST00000263897 TPST1O60507 370 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 VAMP5O95183 116 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 ITGA5P08648 1049 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 SLC6A2P23975 617 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 PTH2RP49190 550 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 P2RY4P51582 365 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 SCARB2Q14108 478 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 ZNF672Q499Z4 452 aaPredicted RBP14.15□□□□□ -0.14
USE1-201ENST00000263897 TSPO2Q5TGU0 170 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 METTL21CQ5VZV1 264 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 OR7E24Q6IFN5 339 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 YTHDF3Q7Z739 585 aaKnown RBP14.15□□□□□ -0.14
USE1-201ENST00000263897 DPP10Q8N608 796 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 LSMEM1Q8N8F7 131 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 OR9K2Q8NGE7 335 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 OR52E4Q8NGH9 312 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 MFSD8Q8NHS3 518 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 TSPEARQ8WU66 669 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 NEUROG1Q92886 237 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 FBXW5Q969U6 566 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 CPPED1Q9BRF8 314 aaPredicted RBP14.15□□□□□ -0.14
USE1-201ENST00000263897 SIKE1Q9BRV8 207 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 CXorf56Q9H5V9 222 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 UPB1Q9UBR1 384 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 RPS6KB2Q9UBS0 482 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 LAMP3Q9UQV4 416 aa14.15□□□□□ -0.14
USE1-201ENST00000263897 PRORSD1PA6NEY8 169 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 INHBBP09529 407 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 DANCRP0C864 163 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 EGR4Q05215 589 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 C6orf89Q6UWU4 347 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 AAED1Q7RTV5 226 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 BIVMQ86UB2 503 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 GPAT4Q86UL3 456 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 RETREG3Q86VR2 466 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 COMTD1Q86VU5 262 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 OR52N5Q8NH56 324 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 SMAP2Q8WU79 429 aaPredicted RBP14.14□□□□□ -0.15
USE1-201ENST00000263897 ANKRD27Q96NW4 1050 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 ZNF385AQ96PM9 386 aaKnown RBP14.14□□□□□ -0.15
USE1-201ENST00000263897 ZNF607Q96SK3 696 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 TRIM2Q9C040 744 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 C12orf10Q9HB07 376 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 NPAP1Q9NZP6 1156 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 SLC25A15Q9Y619 301 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 ZFHX3Q15911 3703 aa14.14□□□□□ -0.15
USE1-201ENST00000263897 A0A0G2JND7 137 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 ELOA3DA6NLF2 546 aaPredicted RBP14.13□□□□□ -0.15
USE1-201ENST00000263897 FTCDNL1E5RQL4 147 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 OVOL3O00110 214 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 ANGPT2O15123 496 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 SERPINB7O75635 380 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 AHSA1O95433 338 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 HTR2AP28223 471 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 TGFBR3Q03167 851 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 ELOA3BQ3SY89 546 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 GLIPR1L2Q4G1C9 344 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 CREB3L2Q70SY1 520 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 DHDDSQ86SQ9 333 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 POMGNT2Q8NAT1 580 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 HIPK4Q8NE63 616 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 BHLHE22Q8NFJ8 381 aaPredicted RBP14.13□□□□□ -0.15
USE1-201ENST00000263897 KBTBD8Q8NFY9 601 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 ELOA3Q8NG57 546 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 DNAJA4Q8WW22 397 aaPredicted RBP14.13□□□□□ -0.15
USE1-201ENST00000263897 SLC25A36Q96CQ1 311 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 KTI12Q96EK9 354 aaPredicted RBP14.13□□□□□ -0.15
USE1-201ENST00000263897 Q96MF0 132 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 CGREF1Q99674 301 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 SMR3AQ99954 134 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 BDH2Q9BUT1 245 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 PTDSS2Q9BVG9 487 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 PRR14Q9BWN1 585 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 AMBRA1Q9C0C7 1298 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 CISD1Q9NZ45 108 aaKnown RBP14.13□□□□□ -0.15
USE1-201ENST00000263897 RASD1Q9Y272 281 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 ALPK2Q86TB3 2170 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 CSPG4Q6UVK1 2322 aa14.13□□□□□ -0.15
USE1-201ENST00000263897 TLN2Q9Y4G6 2542 aa14.12□□□□□ -0.15
USE1-201ENST00000263897 A0A1B0GWA3 101 aa14.12□□□□□ -0.15
USE1-201ENST00000263897 A0A1W2PR80 420 aa14.12□□□□□ -0.15
USE1-201ENST00000263897 SHISA9B4DS77 424 aa14.12□□□□□ -0.15
USE1-201ENST00000263897 ABCD4O14678 606 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms