RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 AFMIDQ63HM1 303 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 C5orf46Q6UWT4 87 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 MRPL21Q7Z2W9 205 aaKnown RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 SLC16A11Q8NCK7 471 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SLCO4A1Q96BD0 722 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 FCRL1Q96LA6 429 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 C11orf54Q9H0W9 315 aaPredicted RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 CUTCQ9NTM9 273 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 YARS2Q9Y2Z4 477 aaKnown RBP9.99□□□□□ -0.81
CD44-201ENST00000263398 ECM29Q5VYK3 1845 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CROCCQ5TZA2 2017 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 KLK8O60259 260 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 FUCA1P04066 466 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 RAC2P15153 192 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TEAD1P28347 426 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TRIM23P36406 574 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TMEM64Q6YI46 380 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 GDF7Q7Z4P5 450 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SULF2Q8IWU5 870 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 SLC43A2Q8N370 569 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CELF2-AS1Q8N7Q2 184 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 LGALS14Q8TCE9 139 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 TM9SF4Q92544 642 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 ZIC5Q96T25 663 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 NIPAL2Q9H841 368 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 PDFQ9HBH1 243 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 KCNJ16Q9NPI9 418 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 PLCXD1Q9NUJ7 323 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 LAMB1P07942 1786 aa9.99□□□□□ -0.81
CD44-201ENST00000263398 CDC14CA4D256 554 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TRIM64A6NGJ6 449 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 DPM1O60762 260 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 LIPCP11150 499 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 MAKP20794 623 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 ARRB2P32121 409 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 SLC6A12P48065 614 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 VASPP50552 380 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 TMEFF1Q8IYR6 380 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 STEAP2Q8NFT2 490 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 SMAP2Q8WU79 429 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 NUDT8Q8WV74 236 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 LRIT1Q9P2V4 623 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CLEC2DQ9UHP7 191 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CA5BQ9Y2D0 317 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 ARAP2Q8WZ64 1704 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TARM1B6A8C7 271 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 SLC35E2P0CK97 266 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TACR3P29371 465 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TAS2R20P59543 309 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 ECH1Q13011 328 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CNN3Q15417 329 aaKnown RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 TECPR1Q7Z6L1 1165 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 LILRB2Q8N423 598 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 FAM109AQ8N4B1 249 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 NLGN4YQ8NFZ3 816 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 OR51Q1Q8NH59 317 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 DUSP19Q8WTR2 217 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CDH20Q9HBT6 801 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 ACER3Q9NUN7 267 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 SLC25A37Q9NYZ2 338 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 VSX1Q9NZR4 365 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 CD207Q9UJ71 328 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CAMK2AQ9UQM7 478 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CDK5RAP2Q96SN8 1893 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TMEM129A0AVI4 362 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TMEM82A0PJX8 343 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 H3BQ06 376 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 CD14P08571 375 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 ZDHHC11BP0C7U3 371 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 PIPP12273 146 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 PKLRP30613 574 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 OR1D4P47884 311 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CX3CR1P49238 355 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 CLDN12P56749 244 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 DPY19L4Q7Z388 723 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 BCDIN3DQ7Z5W3 292 aaKnown RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 C19orf47Q8N9M1 422 aaKnown RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 RLN3Q8WXF3 142 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 TXNDC15Q96J42 360 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 SLC41A2Q96JW4 573 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 SGCZQ96LD1 299 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 HHIPQ96QV1 700 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 NMNAT3Q96T66 252 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 GLTPQ9NZD2 209 aa9.98□□□□□ -0.81
CD44-201ENST00000263398 THAP10Q9P2Z0 257 aaPredicted RBP9.98□□□□□ -0.81
CD44-201ENST00000263398 LOC102725191A0A1B0GVB3 256 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 SULT1C2O00338 296 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 IGLV3-27P01718 113 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 TCRBP04435 133 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 CLEC2LP0C7M8 214 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 PXNP49023 591 aaPredicted RBP9.97□□□□□ -0.81
CD44-201ENST00000263398 PGFP49763 221 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 PSPHP78330 225 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 SRYQ05066 204 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 CLVS2Q5SYC1 327 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 TANGO2Q6ICL3 276 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 OR5M10Q6IEU7 315 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 OPN5Q6U736 354 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 COX15Q7KZN9 410 aa9.97□□□□□ -0.81
CD44-201ENST00000263398 NDUFAF7Q7L592 441 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms