RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 GNRHR2Q96P88 292 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 UTP23Q9BRU9 249 aaKnown RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 TIMMDC1Q9NPL8 285 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 NRIP3Q9NQ35 241 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 PTPRZ1P23471 2315 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 EFCAB10A6NFE3 127 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 FTCDNL1E5RQL4 147 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 PRODHO43272 600 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 OR2T1O43869 369 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 CDK1P06493 297 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 IL11P20809 199 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 PCMT1P22061 227 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 AQP2P41181 271 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 ZNF91Q05481 1191 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 ZNF362Q5T0B9 420 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 SLC35F1Q5T1Q4 408 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 ARHGAP11AQ6P4F7 1023 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 MAMDC2Q7Z304 686 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 NANOGNBQ7Z5D8 188 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 IGFN1Q86VF2 1251 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 ANKK1Q8NFD2 765 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 DDIT4LQ96D03 193 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 CCDC90BQ9GZT6 254 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 HINT3Q9NQE9 182 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 DEPPQ9NTK1 212 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 RPL36Q9Y3U8 105 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 BLOC1S5-TXNDC5H3BN57 136 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 CBR3O75828 277 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 WDPCPO95876 746 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 F10P00742 488 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 DBTP11182 482 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 DPP4P27487 766 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 RPL4P36578 427 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 FOXK1P85037 733 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 TMEM44Q2T9K0 475 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 SPINK14Q6IE38 97 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 LINC00696Q6ZRV3 163 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 GTPBP8Q8N3Z3 284 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 JSRP1Q96MG2 331 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 ERMAPQ96PL5 475 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 SIGLEC12Q96PQ1 595 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 POTEKPQ9BYX7 375 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 SERINC1Q9NRX5 453 aa20.67■□□□□ 0.9
SMARCB1-201ENST00000263121 ARPC3O15145 178 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 HIST1H2ABP04908 130 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 HK1P19367 917 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 CNR1P21554 472 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 RPL18Q07020 188 aaKnown RBP20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 FOXC1Q12948 553 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 NEDD8Q15843 81 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 SGCBQ16585 318 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 ALG10Q5BKT4 473 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 NXNL2Q5VZ03 156 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 C3orf33Q6P1S2 294 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 HIST3H2AQ7L7L0 130 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 HIST1H2ACQ93077 130 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 SLC25A36Q96CQ1 311 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 DNAJA3Q96EY1 480 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 ARL5BQ96KC2 179 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 TAPBPLQ9BX59 468 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 VCX3AQ9NNX9 186 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 IER3IP1Q9Y5U9 82 aa20.66■□□□□ 0.9
SMARCB1-201ENST00000263121 LRRC3CA6NJW4 275 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 RIIAD1A6NNX1 92 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 ZIC3O60481 467 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 FZD7O75084 574 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 TCEA1P23193 301 aaKnown RBP20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 GRPRP30550 384 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 EMX1Q04741 257 aaPredicted RBP20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 ST3GAL4Q11206 333 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 CDC20Q12834 499 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 FOXB2Q5VYV0 432 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 CXXC5Q7LFL8 322 aaKnown RBP20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 CPOQ8IVL8 374 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 OR5M1Q8NGP8 315 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 OR5J2Q8NH18 312 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 MFSD8Q8NHS3 518 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 TMIGD2Q96BF3 282 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 KATNB1Q9BVA0 655 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 SLC6A5Q9Y345 797 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 ADAM18Q9Y3Q7 739 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 SPIN1Q9Y657 262 aaPredicted RBP20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 MED13Q9UHV7 2174 aa20.65■□□□□ 0.9
SMARCB1-201ENST00000263121 ZNF891A8MT65 544 aaPredicted RBP20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 IDH3BO43837 385 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 CD14P08571 375 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 STSP08842 583 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 APEHP13798 732 aaKnown RBP20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 NOS3P29474 1203 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 C21orf33P30042 268 aaPredicted RBP20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 MVKQ03426 396 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 SELENBP1Q13228 472 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 PMS2P3Q13401 168 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 OR1C1Q15619 314 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 AGAP7PQ5VUJ5 663 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 SLC6A19Q695T7 634 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 STX19Q8N4C7 294 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 SVOPQ8N4V2 548 aa20.64■□□□□ 0.9
SMARCB1-201ENST00000263121 AGAP4Q96P64 663 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms