RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 RPTNQ6XPR3 784 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF783Q6ZMS7 281 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
SCARF1-201ENST00000263071 CHST8Q9H2A9 424 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ZMIZ1Q9ULJ6 1067 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 HMGN4O00479 90 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 SMAD9O15198 467 aaKnown RBP13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ADAP00813 363 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 IGHA2P01877 340 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 CLUP10909 449 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ACHEP22303 614 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 HTR5AP47898 357 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ETFRF1Q6IPR1 90 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 FAM71E1Q6IPT2 247 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 BAIAP2L2Q6UXY1 529 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 ZCCHC10Q8TBK6 192 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
SCARF1-201ENST00000263071 IRF7Q92985 503 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 CHRDQ9H2X0 955 aa13.11□□□□□ -0.31
SCARF1-201ENST00000263071 GMFGO60234 142 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 NOS3P29474 1203 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 WNT4P56705 351 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 OR2B8PP59922 312 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PRR5P85299 388 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 RSU1Q15404 277 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PYY3Q5JQD4 70 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PLBD1Q6P4A8 553 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 MSANTD1Q6ZTZ1 278 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PRICKLE2Q7Z3G6 844 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 FOXRED2Q8IWF2 684 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 CNTNAP3BQ96NU0 1288 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PCDHB10Q9UN67 800 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 LSM2Q9Y333 95 aaKnown RBP13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 PGRMC2O15173 223 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 B4GALT2O60909 372 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 AQP8O94778 261 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 ABLIM3O94929 683 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 LATS1O95835 1130 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 ADH1AP07327 375 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 VIPR2P41587 438 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 SAPCD1Q5SSQ6 148 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 TMEM71Q6P5X7 295 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
SCARF1-201ENST00000263071 GAL3ST3Q96A11 431 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 LRFN5Q96NI6 719 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 CA10Q9NS85 328 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 SLC23A2Q9UGH3 650 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 OR8U8P0C7N1 319 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 GKN3PP0CG01 181 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 THEGLP0DJG4 465 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 SLC6A11P48066 632 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 OR10A3P58181 314 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 WDR5P61964 334 aaKnown RBP13.1□□□□□ -0.31
SCARF1-201ENST00000263071 NUTF2P61970 127 aaKnown RBP13.1□□□□□ -0.31
SCARF1-201ENST00000263071 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 OR51A7Q8NH64 312 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 OR10J5Q8NHC4 309 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 ISG20L2Q9H9L3 353 aaKnown RBP13.1□□□□□ -0.31
SCARF1-201ENST00000263071 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 SIRT7Q9NRC8 400 aa13.1□□□□□ -0.31
SCARF1-201ENST00000263071 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 HIST1H2ABP04908 130 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 CCR9P51686 369 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 HIST3H2AQ7L7L0 130 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 UBAC2Q8NBM4 344 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 OR1S2Q8NGQ3 325 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 OR56A3Q8NH54 315 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GNPDA2Q8TDQ7 276 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 HIST1H2ACQ93077 130 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 MARS2Q96GW9 593 aaKnown RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GPN1Q9HCN4 374 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GDE1Q9NZC3 331 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GPR55Q9Y2T6 319 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 MMACHCQ9Y4U1 282 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 J3QLW9 94 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 MBTPS2O43462 519 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 CREBL2O60519 120 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-201ENST00000263071 PRAF2O60831 178 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 IFNA10P01566 189 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF19P17023 458 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 RAG2P55895 527 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 GLO1Q04760 184 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 ARHGAP40Q5TG30 622 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 ADAM5Q6NVV9 412 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
SCARF1-201ENST00000263071 Q6ZNB5 142 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms