RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PPP2CBP62714 309 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 PPP2CAP67775 309 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SIRPAP78324 504 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SORDQ00796 357 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 CBFBQ13951 182 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RAB33AQ14088 237 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 ARHGAP19Q14CB8 494 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 FAM74A1Q5RGS3 127 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RPL13AP3Q6NVV1 102 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RAB11FIP2Q7L804 512 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RANBP3LQ86VV4 465 aaPredicted RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 GFI1Q99684 422 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 ACTRT3Q9BYD9 372 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 PCBD2Q9H0N5 130 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 ANKRD10Q9NXR5 420 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 DENND4AQ7Z401 1863 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 OBSL1O75147 1896 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 TRAPPC13A5PLN9 417 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 OR6C74A6NCV1 312 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 ERI3O43414 337 aaKnown RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 GATCO43716 136 aaKnown RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 EDNRAP25101 427 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 STARP49675 285 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF136P52737 540 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SSTP61278 116 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 CSNK1G2P78368 415 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 POU4F2Q12837 409 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 STX4Q12846 297 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RBMS2Q15434 407 aaKnown RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 TSSK4Q6SA08 328 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 CDK20Q8IZL9 346 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SGK3Q96BR1 496 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 NUS1Q96E22 293 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 SLC35A4Q96G79 324 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF768Q9H5H4 540 aaKnown RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 BARX1Q9HBU1 254 aaPredicted RBP13.79□□□□□ -0.2
XRCC1-201ENST00000262887 POT1Q9NUX5 634 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 WDR45Q9Y484 360 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 TRAV27A0A087WT01 109 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ATG12O94817 140 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 PAPLNO95428 1278 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 MGMTP16455 207 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ACTA2P62736 377 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ACTG2P63267 376 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 CCDC157Q569K6 752 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 C11orf88Q6PI97 169 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ARL14Q8N4G2 192 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 SLC16A11Q8NCK7 471 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 OR51A7Q8NH64 312 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 OR5K2Q8NHB8 316 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 NANPQ8TBE9 248 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 GSN-AS1Q9NRJ2 163 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 HAO2Q9NYQ3 351 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 GNG8Q9UK08 70 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 GPR34Q9UPC5 381 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 CCL26Q9Y258 94 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 A0A1B0GTQ1 180 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 RAB40ALP0C0E4 278 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ACHEP22303 614 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 HIST1H1TP22492 207 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-201ENST00000262887 CDK2P24941 298 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 HAGHLQ6PII5 290 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-201ENST00000262887 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-201ENST00000262887 RNF113BQ8IZP6 322 aaKnown RBP13.78□□□□□ -0.2
XRCC1-201ENST00000262887 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 MUC20Q8N307 709 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ACOT4Q8N9L9 421 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 SNX33Q8WV41 574 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 TNFAIP8L1Q8WVP5 186 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 RAB40AQ8WXH6 277 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 CDS1Q92903 461 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 BPIFA2Q96DR5 249 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-201ENST00000262887 TMEM138Q9NPI0 162 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 SIGLEC7Q9Y286 467 aa13.78□□□□□ -0.2
XRCC1-201ENST00000262887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 A0A1W2PPV9 198 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 ACOD1A6NK06 481 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 DISC1C4P0D8 188 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 C4orf51C9J302 202 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 GKN3PP0CG01 181 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 SYN1P17600 705 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 CNR1P21554 472 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 FAUP35544 74 aaKnown RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 MPPED2Q15777 294 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 SMAD2Q15796 467 aaKnown RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 RPE65Q16518 533 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 NDUFAF6Q330K2 333 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 Q3ZCU0 254 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 PWWP2BQ6NUJ5 590 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 SLC48A1Q6P1K1 146 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 RPL22L1Q6P5R6 122 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms