RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 DMKNQ6E0U4 476 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 HACD2Q6Y1H2 254 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 C3orf62Q6ZUJ4 267 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SSX9Q7RTT3 188 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PRSS48Q7RTY5 328 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SCD5Q86SK9 330 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CCDC50Q8IVM0 306 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MICU2Q8IYU8 434 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 FAM58AQ8N1B3 248 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 LINC00612Q8N6U2 182 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 OR4K14Q8NGD5 310 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 OR10Z1Q8NGY1 313 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 FANK1Q8TC84 345 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MCHR2Q969V1 340 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 RAD51AP1Q96B01 352 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 FAM122AQ96E09 287 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZBED6CLQ96FA7 236 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MCCC1Q96RQ3 725 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 NDEL1Q9GZM8 345 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 HDHD2Q9H0R4 259 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TPK1Q9H3S4 243 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MRPS30Q9NP92 439 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MRPL22Q9NWU5 206 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PDP1Q9P0J1 537 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PIPOXQ9P0Z9 390 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 GCNT4Q9P109 453 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PACSIN2Q9UNF0 486 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SLC22A14Q9Y267 594 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PIGLQ9Y2B2 252 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ADCY9O60503 1353 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 A0A1W2PPV4 95 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TUBAL3A6NHL2 446 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ARGFXA6NJG6 315 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 C12orf71A8MTZ7 269 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 C9JVG2 144 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 H3BMH7 237 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 H3BTX0 84 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CLDN5O00501 218 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 STX10O60499 249 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 RAMP1O60894 148 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SCGNO76038 276 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SNAPINO95295 136 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ASS1P00966 412 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 HMOX2P30519 316 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 GPR4P46093 362 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CSNK1EP49674 416 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CDH6P55285 790 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 RAG2P55895 527 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 XIAPP98170 497 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SLAQ13239 276 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CAPRIN1Q14444 709 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 MESDQ14696 234 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TRIP10Q15642 601 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZIC1Q15915 447 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CDKN3Q16667 212 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 DNAL1Q4LDG9 190 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TMEM31Q5JXX7 168 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 UTF1Q5T230 341 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PYHIN1Q6K0P9 492 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZSCAN25Q6NSZ9 544 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CENPUQ71F23 418 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 EIF3MQ7L2H7 374 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 BHLHA15Q7RTS1 189 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ERASQ7Z444 233 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TSEN54Q7Z6J9 526 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 LHFPL4Q7Z7J7 247 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 HPS6Q86YV9 775 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 VSTM4Q8IW00 320 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ASCC1Q8N9N2 400 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 GATSQ8NAP1 163 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SYT14Q8NB59 555 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CCDC112Q8NEF3 446 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 NDNFQ8TB73 568 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 M1APQ8TC57 530 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TNFRSF14Q92956 283 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZNF707Q96C28 371 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 DNAJA3Q96EY1 480 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ELMO2Q96JJ3 720 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 CEP170P1Q96L14 293 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 OPALINQ96PE5 141 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TESK2Q96S53 571 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TSC22D3Q99576 134 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 RIT2Q99578 217 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TMEM175Q9BSA9 504 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 GBA3Q9H227 469 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 RANBP3Q9H6Z4 567 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZNF160Q9HCG1 818 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 DCAF13Q9NV06 445 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 ZNF107Q9UII5 783 aaPredicted RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 TBC1D24Q9ULP9 559 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 NTNG1Q9Y2I2 539 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 SAMHD1Q9Y3Z3 626 aaKnown RBP3.36□□□□□ -1.87
CCDC54-201ENST00000261058 USP16Q9Y5T5 823 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 FKBP7Q9Y680 259 aa3.36□□□□□ -1.87
CCDC54-201ENST00000261058 PPIP5K1Q6PFW1 1433 aa3.35□□□□□ -1.87
CCDC54-201ENST00000261058 METP08581 1390 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms