RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 RGS11O94810 467 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PRR23D2P0DMB1 279 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 ATF1P18846 271 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MC3RP41968 323 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 BLKP51451 505 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 GK2Q14410 553 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 STK11Q15831 433 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 FAM27D1Q5T7N8 215 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 OLFML2AQ68BL7 652 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF626Q68DY1 528 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 DMKNQ6E0U4 476 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 ZCCHC12Q6PEW1 402 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 TMUB2Q71RG4 321 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 OVCH1Q7RTY7 1134 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 STPG2Q8N412 459 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 TMEM99Q8N816 258 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 OR9A2Q8NGT5 310 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 COQ8AQ8NI60 647 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 FAM3CQ92520 227 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PMM1Q92871 262 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PGLYRP3Q96LB9 341 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MACROD1Q9BQ69 325 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 CHIAQ9BZP6 476 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 DNTTIP1Q9H147 329 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 IFT22Q9H7X7 185 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 NKIRAS2Q9NYR9 191 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MED11Q9P086 117 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 DAPP1Q9UN19 280 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PCDHGA9Q9Y5G4 932 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MDC1Q14676 2089 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 A0A0J9YY10 115 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OR6C74A6NCV1 312 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC22A31A6NKX4 558 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SCAMP1O15126 338 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 FLRT2O43155 660 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CREBL2O60519 120 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 GMDSO60547 372 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 PTP4A3O75365 173 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 ARL6IP5O75915 188 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OR5F1O95221 314 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC2A10O95528 541 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 STATHP02808 62 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 ATP1B1P05026 303 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SNRPBP14678 240 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 HOXA1P49639 335 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 VEGFCP49767 419 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 UBE2IP63279 158 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC3A1Q07837 685 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 FUT5Q11128 374 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CCINQ13939 588 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 GPR18Q14330 331 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 UBXN2BQ14CS0 331 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 EIPR1Q53HC9 387 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 RNASE12Q5GAN4 147 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SFRP4Q6FHJ7 346 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 HEPHL1Q6MZM0 1159 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 RNF44Q7L0R7 432 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OOSP2Q86WS3 158 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OR2L13Q8N349 312 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OR5M9Q8NGP3 310 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CCL4L1Q8NHW4 92 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 BAHD1Q8TBE0 780 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CNOT9Q92600 299 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 ART5Q96L15 291 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 OR10A4Q9H209 315 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 UBQLN3Q9H347 655 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 BEX1Q9HBH7 125 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 MCCC2Q9HCC0 563 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 KLHL1Q9NR64 748 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 KLHL9Q9P2J3 617 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CPNE7Q9UBL6 633 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 GMEB2Q9UKD1 530 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 FLVCR2Q9UPI3 526 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 KCNK7Q9Y2U2 307 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC22A7Q9Y694 548 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 LRP4O75096 1905 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 ATG2BQ96BY7 2078 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 A0A087WV62 115 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CPSF4LA6NMK7 179 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 ANXA2P2A6NMY6 339 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 LGALS8O00214 317 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 GATBO75879 557 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 AK1P00568 194 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 CD1AP06126 327 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 ADRB1P08588 477 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 H2AFB1P0C5Y9 115 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 C8orf89P0DMQ9 161 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 POU3F2P20265 443 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 TBXA2RP21731 343 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 MAOBP27338 520 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 GCGRP47871 477 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 E2F1Q01094 437 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 PABPC1L2AQ5JQF8 200 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 PRPF38BQ5VTL8 546 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 FCRL6Q6DN72 434 aa9.94□□□□□ -0.82
CHRNA1-201ENST00000261007 MFSD12Q6NUT3 480 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms