RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 XAF1Q6GPH4 301 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 C16orf87Q6PH81 154 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 GGNQ86UU5 652 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 ZNF440Q8IYI8 595 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 CLIP4Q8N3C7 705 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 FAM162AQ96A26 154 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 ZNF607Q96SK3 696 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 ACER3Q9NUN7 267 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 ANGPT4Q9Y264 503 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 CHST2Q9Y4C5 530 aa15.08■□□□□ 0
SDCBP-201ENST00000260130 UTP20O75691 2785 aaKnown RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 A0A0G2JNJ9 132 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 TOXO94900 526 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 OPN1LWP04000 364 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 C6orf141Q5SZD1 244 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 CCDC71Q8IV32 467 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 ZZZ3Q8IYH5 903 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 ASB5Q8WWX0 329 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 MAGIXQ9H6Y5 334 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 TMEM185BQ9H7F4 350 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 Q9UFV3 132 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 MAGED1Q9Y5V3 778 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 A1L4Q6 167 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 MBD3L4A6NDZ8 208 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 MBD3L3A6NE82 208 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 MBD3L5A6NJ08 208 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 CXCR6O00574 342 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 AP3D1O14617 1153 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 SERPINB7O75635 380 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 CLDN1O95832 211 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 IL2RAP01589 272 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 IMPDH2P12268 514 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 ZNF182P17025 639 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 AQP1P29972 269 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 CHRNB4P30926 498 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 CEACAM8P31997 349 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 IDH2P48735 452 aaKnown RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 RPS3AP61247 264 aaKnown RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 PPP2R2BQ00005 443 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 ANKDD1AQ495B1 522 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 SLC30A8Q8IWU4 369 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 SPARTQ8N0X7 666 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 MBD3L2Q8NHZ7 208 aaPredicted RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 CA5BP1Q8WTZ4 195 aa15.07■□□□□ 0
SDCBP-201ENST00000260130 TRUB1Q8WWH5 349 aaKnown RBP15.07■□□□□ 0
SDCBP-201ENST00000260130 FAAHO00519 579 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 EIF1AYO14602 144 aaKnown RBP15.06■□□□□ 0
SDCBP-201ENST00000260130 ADAMDEC1O15204 470 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 GP1BBP13224 206 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 PRKAR1BP31321 381 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 DLX5P56178 289 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 PCBP3P57721 371 aaKnown RBP15.06■□□□□ 0
SDCBP-201ENST00000260130 ESPNLQ6ZVH7 1005 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 ZNF550Q7Z398 422 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 CALHM3Q86XJ0 350 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 MICU2Q8IYU8 434 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 BPIFB6Q8NFQ5 453 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 OR5K1Q8NHB7 308 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 WNT2BQ93097 391 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 MBOAT4Q96T53 435 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 SMURF2Q9HAU4 748 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 SNX5Q9Y5X3 404 aa15.06■□□□□ 0
SDCBP-201ENST00000260130 HSPB2A8KAH6 182 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 CLPXO76031 633 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 CLDN14O95500 239 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 GKN3PP0CG01 181 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 BMXP51813 675 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 SELENBP1Q13228 472 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 CDSNQ15517 529 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 HSPB2Q16082 182 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 SGCBQ16585 318 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 VMACQ2NL98 169 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 RFX4Q33E94 735 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 PLXDC2Q6UX71 529 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 PLEKHM3Q6ZWE6 761 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 MAMDC2Q7Z304 686 aaPredicted RBP15.05■□□□□ 0
SDCBP-201ENST00000260130 FAM86B1Q8N7N1 296 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 TM9SF2Q99805 663 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 PINK1Q9BXM7 581 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 RSPO3Q9BXY4 272 aaPredicted RBP15.05■□□□□ 0
SDCBP-201ENST00000260130 CLCF1Q9UBD9 225 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 ORC6Q9Y5N6 252 aa15.05■□□□□ 0
SDCBP-201ENST00000260130 DOPEY2Q9Y3R5 2298 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 A0A0J9YW62 118 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 GJE1A6NN92 205 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 PCGF2P35227 344 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 SFTPDP35247 375 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 APOBEC1P41238 236 aaKnown RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 ACAA2P42765 397 aaKnown RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 EIF1AXP47813 144 aaKnown RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 IL18R1Q13478 541 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 SPTAN1Q13813 2472 aaKnown RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 CTU2Q2VPK5 515 aaKnown RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 GTF2IRD2BQ6EKJ0 949 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 GRINAQ7Z429 371 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 GTF2IRD2Q86UP8 949 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 ARMC8Q8IUR7 673 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 C9orf106Q8NAJ2 232 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 NAXEQ8NCW5 288 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 ATP6V1C2Q8NEY4 427 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms